Pairwise Alignments

Query, 504 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 505 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

 Score =  166 bits (420), Expect = 2e-45
 Identities = 140/494 (28%), Positives = 223/494 (45%), Gaps = 17/494 (3%)

Query: 20  TAGLAQAAGVLTIGCREDSTTFDPIKSAQNRDTWVFANVYDTLVRVDNLGTKMEPGLAES 79
           +AGLA A   L IG   D    DP  +      +VF+ + + LV VD    K+ PGLA+ 
Sbjct: 19  SAGLAHAESTLRIGLGSDPDMLDPATARTYYGRFVFSAMCERLVDVDQ-HLKIVPGLAKD 77

Query: 80  WDISKDGLTYTFKLRDA-KFSDGSAITADDAAFSLLRIRDNKASLWADPFNLINTAKASD 138
           W  S DG T T  LR+   F DG    A    +++ R      SL     + I + + + 
Sbjct: 78  WAYSDDGKTLTLHLREGVTFHDGEKFDAQSVKYNIERYLTLPGSLRKSELSSIESVEVTA 137

Query: 139 PKTLVVTLKTPAVAFLSQLASPTVSILSEKAMTKMGEDAYSENPVTSGAFTVDEWRKGDR 198
           P T+V  LKT   A L QL     ++++ +A  K    A+   PV SG +      + DR
Sbjct: 138 PYTVVFHLKTADAALLMQLTDRAGTMMAPEATAKGNVAAH---PVCSGPYEFVSRVQQDR 194

Query: 199 VILKKNPNFWQAKNVSLDGVEWVSVTDDNTRMRMVQNNELDTAIFVPFSRVEELKKDKNV 258
           ++LK+  N+W       D V ++ + D + R+  ++  +LD    +  S    +K D N+
Sbjct: 195 IVLKRFENYWNKGAYHFDKVVFLPIPDASVRLANLRAGDLDITEGIAASDTATVKADSNL 254

Query: 259 VIHADPSTREDHLLINHEHG-------LLAKPEVRQALDMAIDKQSLVKTATYGQGTVAY 311
            + +        L IN  +G       L     VRQAL +AID+ +L +    GQ T A 
Sbjct: 255 QLASTTGLGYMGLTINIANGTANTNTPLAKDARVRQALSLAIDRDALNQVVFQGQYTPAN 314

Query: 312 SYIPKGSLYHYANNLQRPYDPTAAKKLLEQAGAK-DLKLNYVVNAGNEADEQIAVIIKDQ 370
                 S YH A+      D   AK LL +AG K  L ++++V A N   +Q+A +++  
Sbjct: 315 QAFSPASPYH-ADIPVPKRDIEKAKALLAEAGVKTPLTIDFLV-ANNPTSQQVAQVLQAM 372

Query: 371 LAKVGVTANLQKVDPTQSWQMLVDGEYDISVMYWTNDILDPDQKTTFVLGHDTNQNYMTR 430
           +++ G+  NLQ  +          GE+ +S+  W+    DPD      L      N   +
Sbjct: 373 VSEAGINLNLQMTEYATLLDRQQRGEFKMSMSGWSGR-PDPDGNIFSFLNTKGGLN-DGK 430

Query: 431 YKNDKVKALVAQARIEADPVKREQMYVELQKLAKQDVNWIDLYYSPYINISRKNVSNFLQ 490
           Y N +V   + +AR+ +D  KR+ +Y ++      D   + LY+ P I    K V+ F+ 
Sbjct: 431 YSNPQVDQWLQEARLTSDVEKRKALYKQIVVQENLDDPLVYLYFEPRIFGMSKKVTGFVP 490

Query: 491 NPLGRFTLEEVVKN 504
              G   L+ +  N
Sbjct: 491 YADGLIRLQGLALN 504