Pairwise Alignments

Query, 504 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 504 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

 Score =  704 bits (1816), Expect = 0.0
 Identities = 337/503 (66%), Positives = 406/503 (80%)

Query: 1   MQSRHLKLLAAATLTAWSLTAGLAQAAGVLTIGCREDSTTFDPIKSAQNRDTWVFANVYD 60
           M+ +H  ++AA  L A SL + +AQAAGVLTIG REDSTTFDPIKSAQN D WVF+NV+D
Sbjct: 1   MKQKHFNVVAAGVLLALSLVSEMAQAAGVLTIGRREDSTTFDPIKSAQNADNWVFSNVFD 60

Query: 61  TLVRVDNLGTKMEPGLAESWDISKDGLTYTFKLRDAKFSDGSAITADDAAFSLLRIRDNK 120
            LVRVDN GTK+ PGLAESW IS DG TYT K+RDAKFSDG+ +TA DA FSL RIRD+ 
Sbjct: 61  PLVRVDNTGTKLLPGLAESWTISPDGKTYTLKMRDAKFSDGTPVTASDAVFSLTRIRDDA 120

Query: 121 ASLWADPFNLINTAKASDPKTLVVTLKTPAVAFLSQLASPTVSILSEKAMTKMGEDAYSE 180
            SLW D +++I+T KA D  TLV+TLKTP+ AFLSQLA P  S++S++A+TK G D ++E
Sbjct: 121 GSLWKDSYSIIDTLKAPDAHTLVITLKTPSAAFLSQLALPNASVISQQALTKQGADDFAE 180

Query: 181 NPVTSGAFTVDEWRKGDRVILKKNPNFWQAKNVSLDGVEWVSVTDDNTRMRMVQNNELDT 240
           +PV SGAF+V EW +G++V L KNP +W A  V LDGVEW+++ DDNTRM  VQ  E+D 
Sbjct: 181 HPVGSGAFSVKEWTRGEKVELVKNPYYWDAAKVKLDGVEWLTLPDDNTRMLKVQAGEIDA 240

Query: 241 AIFVPFSRVEELKKDKNVVIHADPSTREDHLLINHEHGLLAKPEVRQALDMAIDKQSLVK 300
           A+ +PFSR+  L+KD  + +  D STREDHLLINH HG L K EVRQALD AIDK++++ 
Sbjct: 241 ALSIPFSRISSLQKDPKLAVELDTSTREDHLLINHSHGDLGKVEVRQALDFAIDKKAIID 300

Query: 301 TATYGQGTVAYSYIPKGSLYHYANNLQRPYDPTAAKKLLEQAGAKDLKLNYVVNAGNEAD 360
           T T+G G +A SYIP G+LYHYA+NLQRPYDP  AK+LL  AG K+L L Y+VNAG+E D
Sbjct: 301 TVTFGYGKIANSYIPDGALYHYADNLQRPYDPEKAKQLLAAAGVKNLTLKYLVNAGDEVD 360

Query: 361 EQIAVIIKDQLAKVGVTANLQKVDPTQSWQMLVDGEYDISVMYWTNDILDPDQKTTFVLG 420
           EQIAV+++ QLAK G+TANLQKVDP+QSW MLV G+YDISVMYWTNDILDPDQKTTF LG
Sbjct: 361 EQIAVLLQQQLAKAGITANLQKVDPSQSWDMLVAGDYDISVMYWTNDILDPDQKTTFTLG 420

Query: 421 HDTNQNYMTRYKNDKVKALVAQARIEADPVKREQMYVELQKLAKQDVNWIDLYYSPYINI 480
           HD+N NYMTRY NDKVKALVA AR+E DP KREQMY++LQK+AK DVNWIDLYYSPY N+
Sbjct: 421 HDSNMNYMTRYHNDKVKALVAAARVEMDPKKREQMYIDLQKMAKADVNWIDLYYSPYRNV 480

Query: 481 SRKNVSNFLQNPLGRFTLEEVVK 503
           +RKN+ +F QNPLGRFTLEE VK
Sbjct: 481 TRKNIKDFHQNPLGRFTLEETVK 503