Pairwise Alignments

Query, 285 a.a., nickel ABC transporter permease from Pseudomonas simiae WCS417

Subject, 288 a.a., ABC transporter, inner membrane component from Phaeobacter inhibens DSM 17395

 Score =  254 bits (650), Expect = 1e-72
 Identities = 128/283 (45%), Positives = 189/283 (66%), Gaps = 6/283 (2%)

Query: 2   SSRPLIAPWRLRLRFGLRNGRLTAAWGLLILLAWLVLALFAPWIAPYDPIAQNTDFSLLG 61
           ++RP  + W++ LR   + G +    G+ I+    +LA+     APYDP   + +     
Sbjct: 11  ATRPQQSRWQIALR---KPGFMI---GVAIIAVSTLLAIAPGLFAPYDPNFIDYNAVRQP 64

Query: 62  PSLAHPFGTDNYGRDILSRVIWGARIDLQLAIVGVIFPFMIGTFIGAVSGYIGGRFDSVC 121
           PS AHPFGTD  GRD LSRVI    +++Q+A++  +F  +IG  IGA+ GY  G  D + 
Sbjct: 65  PSWAHPFGTDMLGRDSLSRVISAYSVNMQMAVLATVFAMLIGVTIGALVGYYRGIADMIF 124

Query: 122 MRVIDVILAFPFLVLMLAIMAILGPGLKSFYIAMALVGWVSYARLIRSQILVLKESDFAL 181
            RV+D ++ FPFLVL++A++A+LGPGL + YIA+ +VGWV YARL+R++++    +D+A 
Sbjct: 125 GRVVDAVITFPFLVLVIAVVAVLGPGLINMYIAITVVGWVYYARLMRAEVITQMGNDYAS 184

Query: 182 AAKSLGFGHGRILFRHLLPNAMFGSIVFSMSDAVLVLLNGAAVSYLGLGVQPPTAEWGTM 241
           A   +G+   R++FRHLLPNA+   IV+ M+D  L +L G+++ YLGLG QPP AEWG +
Sbjct: 185 AGVVMGYSDRRVIFRHLLPNAITPVIVYWMTDMSLAILLGSSLGYLGLGAQPPQAEWGVL 244

Query: 242 VAEGQAFITTAWWICTFPGLAIVTLAMGFSLLADGVAQVLGDR 284
           +AEG+ FITTAWW+   PG+AIV   +GFSL+ DG+A +L  R
Sbjct: 245 IAEGRNFITTAWWLSLMPGIAIVLTGIGFSLIGDGLADLLRPR 287