Pairwise Alignments

Query, 315 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  194 bits (493), Expect = 2e-54
 Identities = 111/312 (35%), Positives = 178/312 (57%), Gaps = 6/312 (1%)

Query: 7   RFVLYRPLQLLPVLFGISLITFVLVRSIPGDPARALL--GSRST-PDALLKIRAQYGLDQ 63
           RF L R LQ++P +  ++L+ FV+   +PG  A +L   G R+  P  + ++  ++GL++
Sbjct: 3   RFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFADGRRAADPQMIARLNEEFGLNK 62

Query: 64  PLWLQYFYFLKNLLKGDLGQSLLYKVDALKLIVTRIEPTLVLVLGSVVLALLIAVPLATF 123
           PL  ++  ++ +L + DLG S   +   + LI  R+  +L L + +++ AL+I+VPL   
Sbjct: 63  PLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQLAIAAMIFALVISVPLGFV 122

Query: 124 AARNKGGWADNLIRVFTTVGLGMPAFWLGLMLILLLSVQWGLFPVSGYGRTWLDKAHHMV 183
           AA   G   D +  +    GL MP FWLGL+++ L ++Q    P  GYG        +++
Sbjct: 123 AALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPSFGYGD---GSFRNLI 179

Query: 184 LPCLTIALALSAVLVRNLRASMLMELQADHVTAARARGLLEAAVFRRHVLPNSLVPAVNL 243
           LP +T+ +   A+L R  RA +L  L AD +  A ++G+ EA V R HV  N+LV  V  
Sbjct: 180 LPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVARNALVLIVTT 239

Query: 244 LAVNIGWLISGTVVIESLFAIPGIGQLLVRGIFTRDYMVVQGVAMVLACATVIVNFIADV 303
           + +  G LI   VVIE LFA PGIG LLV  + +RD  VVQG  +V+    +++N   D+
Sbjct: 240 VGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLWFLVINTAVDL 299

Query: 304 VTVALDPRVKMQ 315
           +  A+DPR+K +
Sbjct: 300 IYAAIDPRIKQE 311