Pairwise Alignments

Query, 307 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 298 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 66/255 (25%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 11  DAVARHGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFVRRHRDVELTPAGRLFIDEAR 70
           + VA  GS  AA+ +LH+   A+S +++QLE  L V LF R+   + LT  GR  +  A+
Sbjct: 10  NTVALAGSLKAASDKLHKTQPAISQSIKQLESQLDVVLFDRQGYRLALTQEGRKLLQYAQ 69

Query: 71  GVMKKMLGTRRLCQQVANGWSGQLKVAVDSIVKPQRCRQLVLDFYRQFPEVELLLEYEVY 130
            V+ +    R++ + +A G    + +A ++     R   ++     +FP  +++L+ E  
Sbjct: 70  RVLNEAQEMRQVAKHLAIGNEASITLAFEASFNLARILPMLERTQLEFPHTQIILKQEYL 129

Query: 131 NGVWDALADERTDIVIGATSAVPVAS-HFTFRDMGLLNWLCVVS----ARHP-LASVEGL 184
            G  +AL   + DI I A     + S HF    +   + L V S    +R+P L+ V+ L
Sbjct: 130 TGALEALNQGKADIAISAGGIESMRSNHFELGFLFSGSLLDVASPRLLSRYPSLSHVKEL 189

Query: 185 LSDDQLRPFASLCMTDTSRNLPKRDTWTLDNQRRLVVPNWASAIDCLRDGLCVGMAPAHQ 244
           +++ Q      + + DT       +      QRR  V ++ +    ++ G+  G  P + 
Sbjct: 190 VNEYQ------IVIQDTGTGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLPYYM 243

Query: 245 VLPWIERGELVALQL 259
           V   +  G L  L+L
Sbjct: 244 VEEALANGSLHPLEL 258