Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 289 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  202 bits (514), Expect = 7e-57
 Identities = 109/294 (37%), Positives = 173/294 (58%), Gaps = 11/294 (3%)

Query: 1   MDLFQAMSVYVKVVETGSMTAAAQACGMSTTMVGNHLRALEQRLGVSLLKRTTRKQSLTE 60
           M  ++ +S +V V ET S T A +  G+ST  V   + ALEQRL   LL RTTRK S+TE
Sbjct: 1   MQEWEGVSEFVAVAETESFTKAGKRLGISTAQVSRQVGALEQRLDTKLLYRTTRKVSMTE 60

Query: 61  FGGQYYQRCLEVLGLVADSEQLAEQAHSDVPKGTLRITAPPVFGTERLTPALSEFSRRYP 120
            G  YY+ C +VL  + ++E+        +P+G LR+TAP  +G + + P +++F   YP
Sbjct: 61  EGHLYYRHCRQVLDGLEEAERALSSLRG-LPQGLLRMTAPVAYGEKYILPVVNDFLLAYP 119

Query: 121 LINLYVVLSNERMDLVDSGFDAAIRLGELETSSLIARPMQAYTLTLCASPDYLARRGTPQ 180
            + + + L+N ++ LVD+G D AIR+G+L  SSLIA+ +      +CASPDYL R G P 
Sbjct: 120 NVEVDIALTNRQVRLVDAGIDLAIRIGKLADSSLIAKRISQRINYVCASPDYLKRFGEPH 179

Query: 181 TPDDLQHHDCLAFAYPASDNWRDADKLWRMTGESGEVEVPVSGSLTINSSQGLRQAAVNG 240
           +  +L  H+CL   +            WR   +  E ++ + G+L  N+  GLR AA+ G
Sbjct: 180 SLSELSRHNCLIGNH----------DYWRFLEQGRERQLKIKGNLRCNTGHGLRDAALKG 229

Query: 241 MGIIMLADALVQPDLESGKLVALLTTYRLPSRPMHLLYGQDRYRLPKLRAFVDF 294
           +G++ L +  +  DL++G+LV++L  Y+ P+  +  LY Q+R+  PK++  V+F
Sbjct: 230 LGLVQLPNYYIGQDLKAGRLVSVLNAYQEPNEGVWALYPQNRHLSPKVKLMVEF 283