Pairwise Alignments

Query, 299 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

Subject, 298 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  126 bits (317), Expect = 5e-34
 Identities = 90/300 (30%), Positives = 142/300 (47%), Gaps = 20/300 (6%)

Query: 1   MTRPTLKRLL---LQVAFVLSWSSGYIGAKLGTQGGGAFNLLFWRFLL-------VSLCL 50
           ++ P   RLL   +    V+ WSSG++G +  ++  G   +LFWR LL        +L +
Sbjct: 8   LSAPRHHRLLWPMMATLLVVGWSSGFVGIRYASEEAGVMLVLFWRTLLSGVILLPFALTI 67

Query: 51  GLLLNVRLLKVSWVQVRHYAVIGFLSQFLYLSCLYVAIQNGLSPGIAAIIAATQPLMTAA 110
           G LL +R        +    + G +S FLYL    +AI+  +  G+ A+I+   PL  AA
Sbjct: 68  GPLLRMR-------GIAEQMLFGVMSVFLYLGGFALAIEQRVPTGLVALISDLLPLAIAA 120

Query: 111 LSSGSAAERSGGWQWTGLMISFVGVSIVIAGQYGGGGEGVGLVMYLLPLAAALGLTLATL 170
           LS     ER    QW G  I+  GV IV       G     L  Y L + + L   LA++
Sbjct: 121 LSQPVLGERLSARQWFGTAIAVFGVLIVSFDSLSFGA--APLWAYGLTVGSMLVFALASV 178

Query: 171 YERRTVQRQDAGLVLPLFIQSLLTLIGFTGAVLYTDTLSIPHDPDVLISIVWLTLFSTFV 230
             +R  + Q   +   L I +L   + F    +    L+ P      + +VWL L +TF 
Sbjct: 179 LHKRR-RTQHMPVHQSLCIHTLTGSVLFGLCAMMQGDLAPPLTRAFAVGMVWLVLIATFA 237

Query: 231 AYLSLWMLLRVMTATQVAALVYLEPPVTLVWAALMFGDVIQVSTYAGIAVVVGGLLLIRR 290
           AY   +  LR+    QV+A +YL PPVT++WA  +F + +  +T+ G+   + G+ +  R
Sbjct: 238 AYSIYYTSLRLFPVAQVSAAIYLSPPVTMLWAWALFSEPLTAATFIGLTATLVGVWMTSR 297