Pairwise Alignments

Query, 299 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

Subject, 296 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 60.5 bits (145), Expect = 5e-14
 Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 12/269 (4%)

Query: 32  GGGAFNLLFWRFLLVSLCLGLLLNVRLLKVSWVQVRH-YAVIGFLSQFLY-LSCLYV-AI 88
           G  A   L +RFL+  L L + L  +  K+S    RH +  I F   FLY L+ +++   
Sbjct: 31  GANAVTTLMFRFLIAGLILYVFLKFK--KISLKISRHNFVEILFYGAFLYALNTVFLYEA 88

Query: 89  QNGLSPGIAAIIAATQPLMTAALSSGSAAERSGGWQWTGLMISFVGVSIVIAGQYGGGGE 148
            N +  GIA  +    P+    L      E  G  +   L+ SF+G+  ++      GG 
Sbjct: 89  YNYIPTGIATTLHFIYPVTVTLLMISIFKENLGINKVLALIFSFLGMYCLL------GGN 142

Query: 149 GVGLVMYLLPLAAALGLTLA-TLYERRTVQRQDAGLVLPLFIQSLLTLIGFTGAVLYTDT 207
             G  +Y + LAA  GL  A  +      +       + +F  S+L+ +      L+T+T
Sbjct: 143 CAGFDIYGVLLAAGSGLVYAGYIVSAGKCKYSKIDSYVTIFYLSILSSVLLFIYGLFTNT 202

Query: 208 LSIPHDPDVLISIVWLTLFSTFVAYLSLWMLLRVMTATQVAALVYLEPPVTLVWAALMFG 267
           L++        SI  +++F T +A ++    ++++  +  A L  LEP V+++   L+  
Sbjct: 203 LTLNMAFSSYASIGLISIFCTVLALIAFLEGIKLIGPSNTAILSTLEPIVSIILGILLLN 262

Query: 268 DVIQVSTYAGIAVVVGGLLLIRRKRPTVA 296
           +V+      G  +V+  ++++  ++  V+
Sbjct: 263 EVLSFKIGLGSVLVLISVIIVTIEKSKVS 291