Pairwise Alignments

Query, 292 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 789 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 27/258 (10%)

Query: 52  VKNAIEIALTKNTQKQAELEPPDTTDVENKSVSYTL-------ALREVASIMLHELEPRI 104
           VK   +    KN + QAE+E     +   K     L        + +  + + HEL   +
Sbjct: 520 VKEKTQSLREKNRELQAEVEERQRAEAHLKKTQGELIQAAKMAVVGQTMTSLAHELNQPL 579

Query: 105 GILAVKL---REDIPNYDESASRRQMDHLKDFFQAL----SFLRLATEVTGSDSFTCSDW 157
             ++  L   R  +    ++     +DH+++  + +    + LR       SD       
Sbjct: 580 SAMSAYLFSARLALEEAPQAQLATSLDHIENLTERMGKIVNSLRHFARKNSSDESLQPVR 639

Query: 158 INSLIEG-------HSFEKKIRLSG--PQSLIVRADQGLLKLALSNGIKNAVESTISATQ 208
           +NS++E         +  ++I+L    P  L+V AD   L+  L N I N  +++ +  Q
Sbjct: 640 LNSVVEQALVLVQTKAKRQQIKLINTLPDDLMVMADALSLEQVLINLIVNGCDASTTFAQ 699

Query: 209 IRSPEDIIINWGETNVDYWIAVIDDGLGLG-KPTEKLIRIGATTKTGHFGMGLTIAQQAM 267
              P   +I  G       IAVID G G   +  +KL     TTK    G+GL+I Q  +
Sbjct: 700 ---PWVKLIALGTEQGMQRIAVIDSGQGFEHEVVDKLFTPFTTTKEVGLGLGLSICQSLV 756

Query: 268 QSLNGKLSLFSPNSTGAV 285
           + + G+++L S    GA+
Sbjct: 757 EKMQGRIALASNLEKGAM 774