Pairwise Alignments

Query, 232 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 253 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  197 bits (501), Expect = 2e-55
 Identities = 101/224 (45%), Positives = 145/224 (64%), Gaps = 2/224 (0%)

Query: 6   MSEKAILSCRNLGKSYEEGPESVVVLSNLQLELHPGERVAIVGSSGSGKSTLLNLLGGLD 65
           +S+ + ++  NL KS      S+ +L  + L++  GE VAI+G SGSGKSTLL LL  LD
Sbjct: 5   VSKNSAINVVNLEKSVTTQEGSLTILKGINLDVKQGESVAILGPSGSGKSTLLGLLAALD 64

Query: 66  TPSQGSVWLAGEELSALGEKARGQLRNRSLGFVYQFHHLLPEFTALENVCMPLLIGKTAI 125
           TP+ G +WL GE LS L E+ +  LR + + F++Q   L+   TALENV +P  +    +
Sbjct: 65  TPTAGEIWLDGEALSPLNEEQKAALRKQKVSFIFQSFMLVDTLTALENVMLPAELA--GV 122

Query: 126 PEARQRAKALLERVGLGHRLEHKPAELSGGERQRVAIARALVNNPGLVMLDEPTGNLDSH 185
             A+++A+A+L RVGL HRL H P +LSGGE+QRVAIARA +  P ++  DEPTGNLDS 
Sbjct: 123 KNAKEKAEAMLGRVGLSHRLTHLPKQLSGGEQQRVAIARAFICEPKVLFADEPTGNLDSV 182

Query: 186 TAQGIKDLMLELSTQMRTAFLVVTHDMSMARQMDRVLHLQEGHL 229
               I D++ EL+ +  T  ++VTHD+ +A++  R L +  GHL
Sbjct: 183 NGHKIADMLFELNQENHTTLILVTHDLQLAKRCQRQLVMDNGHL 226