Pairwise Alignments

Query, 897 a.a., helicase from Pseudomonas simiae WCS417

Subject, 1149 a.a., helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  167 bits (423), Expect = 3e-45
 Identities = 150/499 (30%), Positives = 227/499 (45%), Gaps = 97/499 (19%)

Query: 428 PYQLEGLSWMQSLRQLEV------GGILADDMGLGKTLQTLAHI----LTEKIAGRLDRP 477
           P+Q  G+ W+  + Q  +      G +LADDMGLGKT   L+ I      ++I+G   +P
Sbjct: 462 PHQDIGVRWILGVEQKSLSDSKVSGALLADDMGLGKTFMALSAIEHIYQRQQISGETKKP 521

Query: 478 CMVVMPTSLIPNWLDEAAH---FTPQLNVLALYGAAR----------------------K 512
            ++V P SL+ NW DE       +P  +V+ L  +A                        
Sbjct: 522 ALIVAPLSLLENWKDEVDKTFKHSPFKDVVILQSSAELNEYRMGGVEIRGQSASDDCLEP 581

Query: 513 KHFATLQDY----------DLLLTTYALLPKDIEQLSALPLHVLILDEAQYIKNPSSKAA 562
           K+   +  Y           L++TTY  L      +  +   +++ DEAQ IKNP++   
Sbjct: 582 KYSLKVGKYFGPSRLDLPERLVITTYQTLRDYQFSMCLIDWGIVVFDEAQNIKNPNALQT 641

Query: 563 QAARELNARQRLCLSGTPLENHLGELWSLFHFLLPGWLGDVKSFNRDYRTPIEKRASD-- 620
           +AA+ L A  +L  +GTP+EN L + W L     PG LG  + F   Y +PI K A D  
Sbjct: 642 RAAKGLKADFKLVATGTPVENSLADFWCLMDTACPGHLGSYQEFRARYISPILKAAGDEV 701

Query: 621 ----VRL-QHLNGRIKPFLLRRTKEQVATELPPK-----TEIIHWVDLNEA-------QR 663
                RL + L   +   +LRR KE     LP K      E  +W  L E        QR
Sbjct: 702 EEIRARLGRELRIAVGALMLRRIKEDNLKGLPLKHMYAGGEFENWKYLEELKSTMVGYQR 761

Query: 664 DVYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNDATL--PARGSS 721
           DVYE    A+  ++ +E +           L  L++LR      RL +   L  P    S
Sbjct: 762 DVYEG---AISHQLENEESH---------ALTTLMRLRDSSLHPRLSDGGRLDIPKNAKS 809

Query: 722 -------SGKLDSLMEMLAELFEEGRRILLFSQFTSMLSLIEVELKK----------RGV 764
                  SGKL SL+E L  +  +  + ++F+    + S + V L +           G 
Sbjct: 810 ARALYGESGKLVSLLETLDRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGD 869

Query: 765 AYALLTGQT-RDRRTPVKDFQSGK-LQIFLISLKAGGVGLNLTEADTVIHYDPWWNPATE 822
           A A+   ++   R++ + DF++ +   + ++S  A GVGL +  A+ V+H + +WNPA E
Sbjct: 870 AKAVAKRKSVPTRKSMISDFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAKE 929

Query: 823 NQATDRAYRIGQEKPVFVY 841
            QATDR YRIGQEK V +Y
Sbjct: 930 AQATDRVYRIGQEKEVHIY 948