Pairwise Alignments

Query, 202 a.a., LexA family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 244 a.a., putative prophage repressor (RefSeq) from Shewanella sp. ANA-3

 Score = 43.1 bits (100), Expect = 4e-09
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)

Query: 118 RVHGMSMKDVGIFDGDLLAVHTTREARNGQIVVARIGDEVTVKRFKREGSKVWLLAENPE 177
           R  G SM  VGI  GD+L V       +G +++A   +E   K      S+  LL+ N +
Sbjct: 155 RARGESMTGVGIHSGDILIVSRQLTPSSGDVIIAMYNEEFVCKVLDLSNSR--LLSANDD 212

Query: 178 FAPIEVNLKDQ 188
           F P+ + L D+
Sbjct: 213 FEPVSIRLDDR 223



 Score = 37.4 bits (85), Expect = 2e-07
 Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 10/126 (7%)

Query: 82  IIGRVAAG-----APILAQQHVEESCNINPTFFHPRADYLLRVHGMSMKDVGIFDGDLLA 136
           II   +AG     +P    Q    S N N    HP A     V   +M  +G+F GDLL 
Sbjct: 8   IISLASAGIHGFESPAAGYQEKALSLN-NLIVSHPSATVFAEVTDDAMTGLGLFTGDLLV 66

Query: 137 VHTTREARNGQIVVARIGDEVTVKRFKREGSKVWLLAE-NPEFAPIEVNLKDQDLVIEGL 195
           V  +  A  G +V+A +  E   ++   +     L A  N  ++ I V      + I+G+
Sbjct: 67  VDKSLTATRGDVVLALVHGETVCRQLDDDHDHHQLHANTNAHYSEISVT---DGIEIQGV 123

Query: 196 SVGVIR 201
           ++  +R
Sbjct: 124 AICAVR 129