Pairwise Alignments

Query, 639 a.a., ABC transporter ATPase from Pseudomonas simiae WCS417

Subject, 555 a.a., energy-dependent translational throttle protein EttA from Vibrio cholerae E7946 ATCC 55056

 Score =  342 bits (876), Expect = 3e-98
 Identities = 203/520 (39%), Positives = 297/520 (57%), Gaps = 14/520 (2%)

Query: 18  LLDKVSWQIARGERVCIIGRNGTGKSSMMKLVKGDQKPDDGSVWRAPGLKIGELPQELPV 77
           +L  +S     G ++ ++G NG GKS++++++ G  K  DG     PGLK+G LPQE  +
Sbjct: 21  ILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIDGEARPQPGLKVGYLPQEPKL 80

Query: 78  ADGRTVFDVVAEGLDGVGALLAEYHHL-AQNCVTEDDLNKLMHVQQDLEA----RDGWRL 132
            + +TV +VV E +  V   L     + A     + D + L   Q +LEA    ++G  L
Sbjct: 81  DESKTVREVVEEAVADVAYALKRLDEVYAAYAEPDADFDALAKEQGELEALIQAKNGHNL 140

Query: 133 QQLVDSTLSRLQLPA-DKTLAELSGGWRRRVLLAQALVSEPDLLLLDEPTNHLDIGAIAW 191
              ++     L+LP  D  +  LSGG RRRV + + L+  PD+LLLDEPTNHLD  ++AW
Sbjct: 141 DNALERAADALRLPEWDAQVKYLSGGERRRVAICRLLLENPDMLLLDEPTNHLDAESVAW 200

Query: 192 LEEALKEFQGAVLFITHDRSFLQNLATRILELDRGGLIDWNGDYASFLVHKEAALAAEET 251
           LE  L ++ G V+ ITHDR FL N A  ILELDRG  I W G+Y S+L  K+A L  E +
Sbjct: 201 LERFLVDYAGTVVAITHDRYFLDNAAGWILELDRGEGIPWQGNYTSWLEQKDARLKQEAS 260

Query: 252 ANALFDKKLAQEEVWIRQGIKARRTRNEGRVRALKALRVERSERRERTGKANIQLDTADK 311
                 K + +E  W+RQ  K R+ +++ R+   + L+    ++R  T +  + +   ++
Sbjct: 261 QEKARQKTIEKELEWVRQNPKGRQAKSKARMARFEELQNTEHQKRNETNE--LFIPPGER 318

Query: 312 SGKQVMVLENVSFHHPDGPFLIKDFSMVLQRGDRIGLLGANGTGKTTLLKLMLSGLQ-PT 370
            G +V+ ++N++    DG  LI D S  + +G  +G++G NG GK+TL K MLSG++ P 
Sbjct: 319 LGDKVIEVKNLTKSF-DGRVLIDDLSFSMPKGAIVGIIGPNGAGKSTLFK-MLSGVEKPD 376

Query: 371 SGTVEEGTRIDVAYFDQLRHQLDLEKTVIDNVAEGRDFIDIDGQSRHVLSYLGDFLFSPQ 430
           SGT+E G  + +A  DQ R  ++ + TV   ++EG D I I+       +Y   F F   
Sbjct: 377 SGTIELGDTVKLASVDQFRDSMNDKHTVFQEISEGADIIRINNFEIPARAYCSRFNFKGV 436

Query: 431 RARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETLELLEEVLLTFNGTVLM 490
             +  +  LSGGER R+ LAKL     N+L+LDEPTNDLDVETL  LEE LL F G  ++
Sbjct: 437 DQQKVIGELSGGERNRVHLAKLLKAGGNVLLLDEPTNDLDVETLRALEEALLEFPGCAMV 496

Query: 491 VSHDRAFLDNVVTSTLVFEGEGKVREYVGG---YQDWLRQ 527
           +SHDR FLD + T  L +  EGKV  Y G    Y +WL+Q
Sbjct: 497 ISHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYMEWLKQ 536



 Score =  114 bits (285), Expect = 1e-29
 Identities = 79/249 (31%), Positives = 128/249 (51%), Gaps = 32/249 (12%)

Query: 3   LLKFSDVSLAFGAMPLLDKVSWQIARGERVCIIGRNGTGKSSMMKLVKGDQKPDDGSVWR 62
           +++  +++ +F    L+D +S+ + +G  V IIG NG GKS++ K++ G +KPD G++  
Sbjct: 323 VIEVKNLTKSFDGRVLIDDLSFSMPKGAIVGIIGPNGAGKSTLFKMLSGVEKPDSGTIEL 382

Query: 63  APGLKIGELPQ-ELPVADGRTVFDVVAEGLDGVGALLAEYHHLAQNCVTEDDLNKLMHVQ 121
              +K+  + Q    + D  TVF  ++EG D +                   +N      
Sbjct: 383 GDTVKLASVDQFRDSMNDKHTVFQEISEGADII------------------RINNF---- 420

Query: 122 QDLEARDGWRLQQLVDSTLSRLQLPADKTLAELSGGWRRRVLLAQALVSEPDLLLLDEPT 181
            ++ AR          S  +   +   K + ELSGG R RV LA+ L +  ++LLLDEPT
Sbjct: 421 -EIPAR-------AYCSRFNFKGVDQQKVIGELSGGERNRVHLAKLLKAGGNVLLLDEPT 472

Query: 182 NHLDIGAIAWLEEALKEFQGAVLFITHDRSFLQNLATRILEL-DRGGLIDWNGDYASFLV 240
           N LD+  +  LEEAL EF G  + I+HDR FL  +AT IL+  D G +  + G+Y  ++ 
Sbjct: 473 NDLDVETLRALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYME 532

Query: 241 HKEAALAAE 249
             +  L A+
Sbjct: 533 WLKQTLGAQ 541