Pairwise Alignments
Query, 639 a.a., ABC transporter ATPase from Pseudomonas simiae WCS417
Subject, 559 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H
Score = 351 bits (901), Expect = e-101
Identities = 199/517 (38%), Positives = 302/517 (58%), Gaps = 11/517 (2%)
Query: 14 GAMPLLDKVSWQIARGERVCIIGRNGTGKSSMMKLVKGDQKPDDGSVWRAPGLKIGELPQ 73
G +L +S G ++ ++G NG GKS++++++ G K G W A G+KIG L Q
Sbjct: 19 GGKEILKGLSLSFLPGAKIGVLGPNGAGKSTVLRIMAGIDKEFGGEAWAADGVKIGYLAQ 78
Query: 74 ELPVADGRTVFDVVAEGLDGVGALLAEYHHLAQN---CVTEDDLNKLM----HVQQDLEA 126
E + + V V +G+ + ALL + ++ V +D++N L+ +Q+ ++A
Sbjct: 79 EPDLDPAKDVMGNVMDGVGPMKALLDRFEEVSAKFGEVVDDDEMNALIAEQAEIQEKIDA 138
Query: 127 RDGWRLQQLVDSTLSRLQLP-ADKTLAELSGGWRRRVLLAQALVSEPDLLLLDEPTNHLD 185
DGW LQ+ V+ + L+ P + + +LSGG RRRV L + L+S+PD+LLLDEPTNHLD
Sbjct: 139 ADGWDLQRQVEIAMDALRCPPGEADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLD 198
Query: 186 IGAIAWLEEALKEFQGAVLFITHDRSFLQNLATRILELDRGGLIDWNGDYASFLVHKEAA 245
++ WLE L+++ G V+ ITHDR FL N A ILE+DRG I + G+Y+++L +K+
Sbjct: 199 AESVGWLEHFLQQYPGTVVAITHDRYFLDNAANWILEVDRGRGIPYEGNYSTYLENKQKR 258
Query: 246 LAAEETANALFDKKLAQEEVWIRQGIKARRTRNEGRVRALKALRVERSERRERTGKANIQ 305
L E DK +++E WIRQ KAR+ +++ R+ A + L S ++ A I
Sbjct: 259 LEQESREEGARDKTISRELEWIRQSPKARQAKSKARITAYENLVA--SAGSQKVESAQIV 316
Query: 306 LDTADKSGKQVMVLENVSFHHPDGPFLIKDFSMVLQRGDRIGLLGANGTGKTTLLKLMLS 365
+ A++ G V+ E ++ D LI D + L G +G++GANG GKTTL K++
Sbjct: 317 IPIAERLGGVVIEAEGLTKGFGDR-LLIDDLTFRLPPGGIVGVIGANGAGKTTLFKMITG 375
Query: 366 GLQPTSGTVEEGTRIDVAYFDQLRHQLDLEKTVIDNVAEGRDFIDIDGQSRHVLSYLGDF 425
QP SG + G + + Y DQ R LD KTV +++G+D +D+ + +Y+G F
Sbjct: 376 KDQPDSGAIRIGETVRLGYVDQSRDALDPNKTVWQEISDGQDELDLGKRKIPSRAYVGQF 435
Query: 426 LFSPQRARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETLELLEEVLLTFN 485
F + V LSGGER R+ LAK+ AN+L+LDEPTNDLDVETL LE+ LL F
Sbjct: 436 NFKGSDQQKKVGQLSGGERNRVHLAKMLKSHANVLLLDEPTNDLDVETLRALEDALLEFA 495
Query: 486 GTVLMVSHDRAFLDNVVTSTLVFEGEGKVREYVGGYQ 522
G +++SHDR FLD + T L FEG+ V + G ++
Sbjct: 496 GCAVVISHDRWFLDRIATHILSFEGDSHVEWFEGNFE 532
Score = 110 bits (274), Expect = 2e-28
Identities = 72/249 (28%), Positives = 125/249 (50%), Gaps = 32/249 (12%)
Query: 3 LLKFSDVSLAFGAMPLLDKVSWQIARGERVCIIGRNGTGKSSMMKLVKGDQKPDDGSVWR 62
+++ ++ FG L+D +++++ G V +IG NG GK+++ K++ G +PD G++
Sbjct: 327 VIEAEGLTKGFGDRLLIDDLTFRLPPGGIVGVIGANGAGKTTLFKMITGKDQPDSGAIRI 386
Query: 63 APGLKIGELPQELPVAD-GRTVFDVVAEGLDGVGALLAEYHHLAQNCVTEDDLNKLMHVQ 121
+++G + Q D +TV+ +++G D E DL K
Sbjct: 387 GETVRLGYVDQSRDALDPNKTVWQEISDGQD------------------ELDLGKRKIPS 428
Query: 122 QDLEARDGWRLQQLVDSTLSRLQLPADKTLAELSGGWRRRVLLAQALVSEPDLLLLDEPT 181
+ + ++ K + +LSGG R RV LA+ L S ++LLLDEPT
Sbjct: 429 RAYVGQFNFKGSD------------QQKKVGQLSGGERNRVHLAKMLKSHANVLLLDEPT 476
Query: 182 NHLDIGAIAWLEEALKEFQGAVLFITHDRSFLQNLATRILELDRGGLIDW-NGDYASFLV 240
N LD+ + LE+AL EF G + I+HDR FL +AT IL + ++W G++ ++
Sbjct: 477 NDLDVETLRALEDALLEFAGCAVVISHDRWFLDRIATHILSFEGDSHVEWFEGNFEAYEA 536
Query: 241 HKEAALAAE 249
K+ L A+
Sbjct: 537 DKKRRLGAD 545
Score = 95.9 bits (237), Expect = 4e-24
Identities = 75/253 (29%), Positives = 113/253 (44%), Gaps = 42/253 (16%)
Query: 312 SGKQVMVLENVSFHHPDGPFLIKDFSMVLQRGDRIGLLGANGTGKTTLLKLMLSGLQPTS 371
S + V V++N+S +P G ++K S+ G +IG+LG NG GK+T+L++M +
Sbjct: 3 SYQYVYVMKNLSKVYPGGKEILKGLSLSFLPGAKIGVLGPNGAGKSTVLRIMAGIDKEFG 62
Query: 372 GTVEEGTRIDVAYFDQLRHQLDLEKTVIDNVAEG------------------RDFIDIDG 413
G + + Y Q LD K V+ NV +G + +D D
Sbjct: 63 GEAWAADGVKIGYLAQ-EPDLDPAKDVMGNVMDGVGPMKALLDRFEEVSAKFGEVVDDDE 121
Query: 414 QS---------------------RHVLSYLGDFLFSPQRARTPVKALSGGERARLLLAKL 452
+ + + D L P V LSGGER R+ L +L
Sbjct: 122 MNALIAEQAEIQEKIDAADGWDLQRQVEIAMDALRCPP-GEADVTKLSGGERRRVALCRL 180
Query: 453 FSKPANLLVLDEPTNDLDVETLELLEEVLLTFNGTVLMVSHDRAFLDNVVTSTLVFEGEG 512
++L+LDEPTN LD E++ LE L + GTV+ ++HDR FLDN L + G
Sbjct: 181 LLSKPDMLLLDEPTNHLDAESVGWLEHFLQQYPGTVVAITHDRYFLDNAANWILEVD-RG 239
Query: 513 KVREYVGGYQDWL 525
+ Y G Y +L
Sbjct: 240 RGIPYEGNYSTYL 252