Pairwise Alignments

Query, 642 a.a., lytic transglycosylase from Pseudomonas simiae WCS417

Subject, 638 a.a., soluble lytic murein transglycosylase, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  295 bits (754), Expect = 6e-84
 Identities = 202/642 (31%), Positives = 309/642 (48%), Gaps = 14/642 (2%)

Query: 5   LFNFLSCLLLSATAVQSAQAVDLTTQRQYYDEAKRALAKGDTGPYMQYSQALADYPLTPY 64
           L  F    L S   +    + D+   RQ + +A++AL +G+   Y +  + L DYPL  Y
Sbjct: 2   LKQFYGICLTSLIFISPLVSADIKDDRQQFLKAEKALREGNKAQYAKLRKGLDDYPLAVY 61

Query: 65  LAYDELTARLKTASNQEIEQFLAKNGDLPQANWMKLRWLRWLAERGDWQTFEKYYDAKLN 124
           L +D     L      + +  +    + P     + R+L   A+   W+ F         
Sbjct: 62  LDFDAQIDSLVMLPGSKAQTAIQAFQNTPFYGNARYRYLLTAAKGARWEDFLAISPDAPK 121

Query: 125 FVELDCLHGQFQLTHNLKAEGYKTAEKLWMTGKSQPAACDVTFGQWAADGQLTEQKIWDR 184
              L C + Q  L    K+   + A +LW+ G S P ACD  F +WA  G  +++ IW R
Sbjct: 122 DTALQCHYYQALLAVGDKSRANEGARRLWLNGSSMPDACDPLFTKWAKAGHRSQELIWSR 181

Query: 185 AKLAAEARNYALANSLVKTLPTLGAQGRLMVDVAQKPDMLSDPSRFLPATEAMSDAVGLG 244
             LA +AR  +L + L + +     + + ++ + + P  L    R+      M++ V LG
Sbjct: 182 MFLAFDAREASLLSYLAQKVTNYPKEAQKLLALYKDPRNLRHMDRYKAKAPVMAEMVELG 241

Query: 245 LRRLARQDPDKAMALLDGYASSMHFSRDEKVSIAREIGLTLAKRYDPRALEVMTKYDPEL 304
           L+ LAR+D  +A++LL  Y  S  F++ +  S+   +   +  R +   L    K+ P L
Sbjct: 242 LKALARKDLKEAVSLLGKYEKSGRFTKVQAQSLHAFMVRRVLLRQEESLLSYAEKHLPPL 301

Query: 305 RDNTVSEWRLRLLLRLARWEDAYQLTRKLPQDLATTNRWRYWQARSLELAEPKNPQALVL 364
             + ++E RLR  +R    +   Q    L ++ A   RW+YW+ R     E    ++  L
Sbjct: 302 ASDDLTELRLRWAIRDGDEKAIKQFLPLLSRETAAKERWQYWRLRY----ETSAGESDTL 357

Query: 365 YKHLAQERDFYGFLAADR---SKAPYQLKNKPLLMSQALVSKVRNTPGVRRALEFYARGQ 421
              LA +R FYGF AA     S A  ++K   +  S          P + R  E     +
Sbjct: 358 SAQLAADRSFYGFHAAQSQGMSPALNEVKASDVSASSDANLTQGADPALARVKELLVLER 417

Query: 422 VVDGRREWYHVSRHFNRDEMVAQAKL---AYDMKWYFPAIRTISQAQYWDDLDIRFPMAH 478
               R EW  +     R++   +AK    A +   +  ++    Q ++WDDL +RFP A 
Sbjct: 418 PRQARVEWLGL---LGREDAAGKAKYGNWALENGLFALSVDASIQGKFWDDLGMRFPPAE 474

Query: 479 RDTLVREAKVRGLHSSWVFAITRQESAFMDDARSGVGASGLMQLMPGTAKETARKFSIPL 538
             +  R AK   L++  + AI R+ESAF   A+S VGA GLMQLMP TAK+TA+K  I  
Sbjct: 475 EQSFARAAKRHKLNAEELRAIARRESAFNPIAQSAVGARGLMQLMPATAKQTAKKQGIKY 534

Query: 539 ASPAQVLDPDKNIQLGAAYLSQVHSQFNGNRVLASAAYNAGPGRVRQWL-RGADHLSFDV 597
           +    + +P  NIQLG+AY + +  ++N NRVLA+AAYNAGP RV  WL R    L    
Sbjct: 535 SGEGSLYEPALNIQLGSAYYASLLERYNNNRVLATAAYNAGPSRVNAWLARSEGKLDVMA 594

Query: 598 WVESIPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERYF 639
           ++ESIPF ETR+YVQ V SY +IY  +  +  PL    E  F
Sbjct: 595 FIESIPFTETREYVQAVFSYRLIYEHRKGNTTPLFSEAELKF 636