Pairwise Alignments

Query, 464 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 461 a.a., MATE family efflux transporter from Synechocystis sp000284455 PCC 6803

 Score =  227 bits (578), Expect = 7e-64
 Identities = 148/453 (32%), Positives = 227/453 (50%), Gaps = 11/453 (2%)

Query: 17  EVRGLLTLALPIMIGQLATTAMSFVDAVMAGRVSPQDLAAVGLGNSIWIPVYLLMTGTLL 76
           E R  L LA+P+   Q+A  A  FVD VM G +    LAA GL   I++   +   G + 
Sbjct: 13  EAREFLKLAVPLAGAQMAQAATGFVDTVMMGWLGQDVLAAGGLATMIFMAFMMTGVGLIS 72

Query: 77  ATTPKVAQRYGAGQFSEIGPLVRQSLWLAVVVGITASLLLLCAEPILHVMNVEPDLIEPS 136
             +P VA+ YGAGQ   IG L RQ LW+ +++ I   L +     ++H        I  S
Sbjct: 73  GVSPLVAEAYGAGQTRRIGQLTRQGLWIVLLLSIPGMLFITHLNGVMHWSGQADTTIILS 132

Query: 137 MGYLHGIAAGM-PAIALYYVLRCFSDGLGRTRPSMVMGLCGLALNIPLNYIFIYGHLGVP 195
             YL+ +A G+ PAIA +  LR     L + RP M++ +     NI  NY   +G  G P
Sbjct: 133 DSYLNVMAWGLFPAIA-FATLRGCIIALSQARPIMLIVIAATLFNILGNYGLGFGKWGFP 191

Query: 196 AMGGVGCGWATAIAMWVMMLGLAVWTRWGPAYQSSELYKRFDWPQWAVIKRVLSIGLPIG 255
           A+G  G   A+  A W+M L L V+  W        L+      +  +++++L +G PIG
Sbjct: 192 ALGITGLAIASISAHWIMFLSLLVYMLWHKPLHQYSLFDSLHHLKPRILQQLLWVGGPIG 251

Query: 256 IAIFAESSIFAVIALLIGSLGATVVSGHQIALNVSSLVFMIPYSLSMAVTVRVGQALGRG 315
           IA   E  ++   +  +G+LG  +++ HQ+      ++FM+P ++S A TVRVGQ  G+ 
Sbjct: 252 IAAVLEYGLYLTASFFMGALGTPILAAHQVVSQTVLVLFMVPLAMSYAATVRVGQWFGQQ 311

Query: 316 EPREARFAAGVGMGTALAYACLSCSLMLLFREQIAAIYTP--DPV---VIHLASMLIVFS 370
              + R AA V +G A+ +   +   +L + +QI  +Y    DP     +++   ++  +
Sbjct: 312 HWPQIRQAALVSIGLAVLFMLTAGIALLAYPQQIIGLYLDLNDPANGEALNVGISIMKIA 371

Query: 371 ALFQFSDSIQVTAAGALRGYQDTRVTMVLTLFAYWGVGLPVGYALGLTNWLGEPSGPSGL 430
           A     D +Q TA G L+G QDTR+ MVL   AYWG+GL   Y LG       P   +G+
Sbjct: 372 AFGLVLDGLQRTANGVLQGLQDTRIPMVLGTIAYWGIGLTASYLLGFYT----PLSGAGV 427

Query: 431 WQGLIVGLSCAAGMLLVRLARSARRRIRADKAR 463
           W G  +GL+ A+   L R  +   R+     AR
Sbjct: 428 WIGTYIGLAAASIAYLWRFQKVMVRKKSLPVAR 460



 Score = 43.1 bits (100), Expect = 2e-08
 Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 14/205 (6%)

Query: 16  REVRGLLTLALPIMIGQLATTAMSFVDAVMAGRVSPQDLAAVGLGNSIWIPVYLLMTGTL 75
           R ++ LL +  PI I  +    +    +   G +    LAA  + +   + ++++     
Sbjct: 238 RILQQLLWVGGPIGIAAVLEYGLYLTASFFMGALGTPILAAHQVVSQTVLVLFMVPLAMS 297

Query: 76  LATTPKVAQRYGAGQFSEIGPLVRQSLWLAVVVGITASLLLLCAEPILHVMNVEPDLIEP 135
            A T +V Q +G   + +I      S+ LAV+  +TA + LL A P   ++ +  DL +P
Sbjct: 298 YAATVRVGQWFGQQHWPQIRQAALVSIGLAVLFMLTAGIALL-AYP-QQIIGLYLDLNDP 355

Query: 136 SMGYLHGIAAGMPAIALYYVLRCFSDGLGRTRPSMVMGLCGLALNIPLNYIFIYGHLGVP 195
           + G    +   +  IA + ++    DGL RT   ++ GL      IP+        LG  
Sbjct: 356 ANGEALNVGISIMKIAAFGLV---LDGLQRTANGVLQGL--QDTRIPM-------VLGTI 403

Query: 196 AMGGVGCGWATAIAMWVMMLGLAVW 220
           A  G+G   +  +  +  + G  VW
Sbjct: 404 AYWGIGLTASYLLGFYTPLSGAGVW 428