Pairwise Alignments

Query, 464 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 459 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  408 bits (1049), Expect = e-118
 Identities = 205/448 (45%), Positives = 291/448 (64%)

Query: 17  EVRGLLTLALPIMIGQLATTAMSFVDAVMAGRVSPQDLAAVGLGNSIWIPVYLLMTGTLL 76
           + + L+ LALP++I Q+  T M F+D VMAGRVS  D+AAV +G S+W+P  L + G L+
Sbjct: 7   QAKRLIQLALPVLIAQVTQTMMGFIDTVMAGRVSAVDMAAVAVGTSLWLPAILFVQGLLM 66

Query: 77  ATTPKVAQRYGAGQFSEIGPLVRQSLWLAVVVGITASLLLLCAEPILHVMNVEPDLIEPS 136
           A TP  A   GA     I PL  Q  +LA++ G+   + L  A  +L  MN+EP L   +
Sbjct: 67  AFTPLFAHHNGANNQKAIQPLAFQGAYLALIGGLGVMVFLASAPLVLSHMNLEPQLYNLT 126

Query: 137 MGYLHGIAAGMPAIALYYVLRCFSDGLGRTRPSMVMGLCGLALNIPLNYIFIYGHLGVPA 196
           +GY+ GI  G PA  LY VLR  S+G+  T P+MV+G  GLA+NIP NYIFIYGH G+PA
Sbjct: 127 IGYIDGILWGAPAFVLYQVLRGCSEGISYTLPTMVIGFVGLAVNIPANYIFIYGHFGIPA 186

Query: 197 MGGVGCGWATAIAMWVMMLGLAVWTRWGPAYQSSELYKRFDWPQWAVIKRVLSIGLPIGI 256
           MGG GCG ATA+  W M++ +A++ ++   + +   + +F  P +A +K++  +GLPI +
Sbjct: 187 MGGAGCGIATALVFWAMLIAMAIYMQFHKKFAALAPFSQFHRPDFATMKKMTKLGLPIAM 246

Query: 257 AIFAESSIFAVIALLIGSLGATVVSGHQIALNVSSLVFMIPYSLSMAVTVRVGQALGRGE 316
           A+F E S+FA+IALL+  LGATVV+ HQIALN S++VFM+P S+ +AV++R+G  LGR  
Sbjct: 247 ALFFEVSLFAIIALLLAPLGATVVASHQIALNFSAIVFMLPLSIGIAVSIRIGYYLGRDR 306

Query: 317 PREARFAAGVGMGTALAYACLSCSLMLLFREQIAAIYTPDPVVIHLASMLIVFSALFQFS 376
              +   A VG+  AL+ A  +  L +LFR QIA +Y  DP V+ LA  L++ +AL+Q S
Sbjct: 307 ADISAVVAKVGLLLALSLALSTAILTVLFRFQIAELYNSDPEVVVLAGSLMLMAALYQLS 366

Query: 377 DSIQVTAAGALRGYQDTRVTMVLTLFAYWGVGLPVGYALGLTNWLGEPSGPSGLWQGLIV 436
           DS+QV AAGALRGY+DTR    +TLF+YWG+G+ +GY L  T+++    G  G W GLI 
Sbjct: 367 DSVQVVAAGALRGYKDTRSAFYITLFSYWGIGMSLGYTLAYTDFIVPAMGAHGFWTGLIA 426

Query: 437 GLSCAAGMLLVRLARSARRRIRADKARG 464
           GL+ AA +  +RL    + R+      G
Sbjct: 427 GLTSAALLFFIRLRYIQKHRVHLSLIEG 454