Pairwise Alignments

Query, 358 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 361 a.a., putative RNA 2'-O-ribose methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  308 bits (790), Expect = 1e-88
 Identities = 172/353 (48%), Positives = 222/353 (62%), Gaps = 8/353 (2%)

Query: 1   MNTLFMHCRPGFEGEVCSEIAEHAARLNVSGYAKAKTGSACAEFVCTEEDGAQRLMHGQR 60
           M  LF++CR G+E +  +EI + AA L + G+ KA    A   F     D   RL     
Sbjct: 1   MKNLFLYCRAGYEKDCAAEIQQRAAELGIGGFVKANRDDAYVVFQGFSPDDGDRLAKELP 60

Query: 61  FAELIFPRQ-WARGVFID--LPETDRISVILAHLREFPVCGSLWLEMVDTNDGKELSNFC 117
              LIF RQ +A G  +D   PE DR++ I   L E    G L +E  DTN+ KELS FC
Sbjct: 61  LDSLIFARQMFACGDLLDDFSPE-DRVTPIAESLTEVERAGELRVETPDTNEAKELSAFC 119

Query: 118 KKFEVHLRKALLNAGTLVDDPS--KPRLLLTFKSGREVFMGLAESNNSAMWPMGIPRLKF 175
           +KF V LR+AL   G L+D  S  +P + + F +  + F G + SNNS+   MGIPRLKF
Sbjct: 120 RKFTVPLRQALKKRGVLLDKESSRRPIVHVCFVAPNKAFTGYSLSNNSSPHFMGIPRLKF 179

Query: 176 PREAPSRSTLKLEEAWHHFIPRDQWDERLHGDMTGVDLGAAPGGWTWQLVNRGMLVTAID 235
           P +APSRSTLKL+EA+ HFIPR++ + RL   +  VDLGA PGGWT+QLV RGM+V AID
Sbjct: 180 PADAPSRSTLKLDEAFIHFIPREEHETRLRSGLNAVDLGACPGGWTYQLVRRGMMVHAID 239

Query: 236 NGPMAESLMDTGLVQHLMADGFTFVP-KQPVDWMVCDIVEKPARNAALLETWIGEGYCRE 294
           NGPM   LM+TG V H  ADGF F P ++ + W+VCD+VEKPAR A L+E W  +G+ +E
Sbjct: 240 NGPMNHDLMETGQVTHHRADGFKFEPARRNIYWLVCDMVEKPARVAELMEYWAIQGWFKE 299

Query: 295 AVVNLKLPMKQRYAEVKRLLERIEDGFKARGV-RVEIGCKQLYHDREEVTCHL 346
           A+ NLKLPMK RY EV ++L  +    K  G+    + CK LYHDR+EVT HL
Sbjct: 300 AIFNLKLPMKSRYKEVSQILANMHAILKENGIHEFHLACKHLYHDRDEVTVHL 352