Pairwise Alignments

Query, 358 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 366 a.a., 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM from Klebsiella michiganensis M5al

 Score =  335 bits (860), Expect = 9e-97
 Identities = 177/355 (49%), Positives = 234/355 (65%), Gaps = 6/355 (1%)

Query: 1   MNTLFMHCRPGFEGEVCSEIAEHAARLNVSGYAKAKTGSACAEFVCTEEDGAQRLMHGQR 60
           MN + ++CRPGFE E  +EI + A+RL V G+A+ K  S    F C + +  ++L+    
Sbjct: 1   MNKVVLYCRPGFEKECAAEITDKASRLEVFGFARVKDDSGYVIFECYQAEDGEKLVRELP 60

Query: 61  FAELIFPRQW--ARGVFIDLPETDRISVILAHLREF-PVCGSLWLEMVDTNDGKELSNFC 117
           F+ L+F RQ      +  DLP  DRIS I+  L+      G L +E+ DTN+ KEL  FC
Sbjct: 61  FSSLVFARQMFVVGELLRDLPPEDRISPIVGMLQGVVEKGGELRVEVADTNESKELMKFC 120

Query: 118 KKFEVHLRKALLNAGTLV--DDPSKPRLLLTFKSGREVFMGLAESNNSAMWPMGIPRLKF 175
           +KF V LR AL  AG L   + P +P + + F +    + G + SNN++ + MGIPRLKF
Sbjct: 121 RKFTVPLRAALREAGVLTNYETPKRPVVHVFFIAPGCCYTGYSLSNNNSPFYMGIPRLKF 180

Query: 176 PREAPSRSTLKLEEAWHHFIPRDQWDERLHGDMTGVDLGAAPGGWTWQLVNRGMLVTAID 235
           P +APSRSTLKLEEA+H FIP D+WDERL   M  VDLGA PGGWT+QLV R M V+++D
Sbjct: 181 PSDAPSRSTLKLEEAFHVFIPADEWDERLANGMYAVDLGACPGGWTYQLVKRNMWVSSVD 240

Query: 236 NGPMAESLMDTGLVQHLMADGFTFVP-KQPVDWMVCDIVEKPARNAALLETWIGEGYCRE 294
           NGPMA+SLMDTG V  L  DGF + P +  + WMVCD+VEKPA+ AAL+  W+  G+CRE
Sbjct: 241 NGPMAQSLMDTGQVTWLREDGFKYRPTRSNISWMVCDMVEKPAKVAALMAQWLVNGWCRE 300

Query: 295 AVVNLKLPMKQRYAEVKRLLERIEDGFKARGVRVEIGCKQLYHDREEVTCHLRRL 349
            + NLKLPMK+RY E+ R L  I++     G+  +I  +QLYHDREEVT H+RRL
Sbjct: 301 TIFNLKLPMKKRYEELSRNLAYIQEQLDEHGINAQIQARQLYHDREEVTVHVRRL 355