Pairwise Alignments

Query, 312 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

 Score = 94.0 bits (232), Expect = 4e-24
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 2/292 (0%)

Query: 1   MNLKFLETFVWVAKLKSFRLTAEKLFTTQASISSRIAVLESELGVKLFLRDSRGVSLTPE 60
           MN++  E  V +A  K FR  AE  F +Q ++S +I  LE E+G  L  R SR V  T  
Sbjct: 1   MNIRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEA 60

Query: 61  GLKVLDYAEQMMVTMQGLK-QSLETTSSKVGRIRIGAMDTVIHTWLSPLVAELMDHFPLV 119
           GL+++D A++++  ++  K  + + T +  G + IG + T+    L  ++  L + FP +
Sbjct: 61  GLQLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPEL 120

Query: 120 EIELVADTALNLSDQLQKGFLDLILQTDLVRLETVRSLELASHPMAWIVASQSIY-NRDY 178
           E+ L       L  QL++G LD ++   +      + +EL +  ++  V     +  RD 
Sbjct: 121 ELYLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARDE 180

Query: 179 ASLAELAQERIITYSKNSHPHQDVISLMQANGVAAPRMNCVNSVSAITRLLRDGFGIGAL 238
             + EL  + ++            +    A G          S+  +  ++  G GI  L
Sbjct: 181 VDMLELKGKTVLALGDGHCLRDQALGFCFAAGAKDDERFKATSLETLRNMVAAGAGITLL 240

Query: 239 PPVLVSEELARGELVMLPMAQKLPNLQVVVSWRVGVELVEEIVGLCQKVVAR 290
           P + + E+  +  +  L     +P+ ++V+++R G  L +    L + +  R
Sbjct: 241 PELALPEDKTKDGVCYLRAVNPIPSRRLVLAYRPGSPLRQRFEQLAEVIKHR 292