Pairwise Alignments

Query, 680 a.a., peptidase S9 from Pseudomonas simiae WCS417

Subject, 700 a.a., protease II (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  439 bits (1130), Expect = e-127
 Identities = 254/679 (37%), Positives = 384/679 (56%), Gaps = 29/679 (4%)

Query: 16  DPYAWLQ--VRDSAEVLDYLKAENAWQEAQLADQAALRETLFEEIKGRILETDLSLPSPW 73
           D Y W++   R   +VL +LKAEN + +A      +L++ LF E+ GR++  + S+P  W
Sbjct: 34  DDYYWMRDDKRQDPKVLAHLKAENRYTQAYFKPLKSLQDGLFNELTGRLVADESSVPYQW 93

Query: 74  GPYLYYTRTTAGDEYARHYRCRRPADDSNQVDDSSEELLLDPNELANGG-FFSLGAFSIS 132
             + YY R   G EY    R         +     E+L+LD NE A G  F+ LG  S+S
Sbjct: 94  HQHSYYRRYQEGSEYPLIAR---------KGSKGVEQLMLDVNERAKGHEFYGLGGVSVS 144

Query: 133 PDHQRLAYSLDTSGEEIYTLYVKELATGKVSELEFEHCDGTMTWANDSLTLFFGELD-DT 191
           PD   LA+  D     +Y +Y K++ +G +     E+ +G + W ND+  +F+   D  T
Sbjct: 145 PDETMLAFGEDVLSRRVYNIYFKDIESGAMITDVLENTEGRIVWGNDNRHVFYIAKDLQT 204

Query: 192 HRPHKLYRYRLDGTAAQEV--FHEPDGRFFLHCYRSSSERQLLLSLGSKTTSEVWALDAD 249
              +++YR+ L    +++V  + E D  +++   +S  E Q++L   S TTSEV  LDA+
Sbjct: 205 LLGNRVYRHELGTPQSRDVLVYEEQDDAYYISLGKSLDESQIVLFHESTTTSEVSVLDAN 264

Query: 250 QPQLDFTCLAPRVEDHEYDVDHGQLNGAWTWFIRSNRDGINYALFVATDIGDVPTEAEWQ 309
            P   F  +  R E HEY V   +L  ++  ++ +N    N+ L     I D   +++WQ
Sbjct: 265 DPLSLFKPVLAREEGHEYSVS--KLGDSY--YVLTNWQATNFRLMKVA-IKDAADKSKWQ 319

Query: 310 NLIPHSDEVMLDGVSLNTHAMTLSLRIGGLPVIEVHP-QGLPAYRVELPDAAYSLYVQNS 368
            ++ H+    L+   +    + +  R  GL  I+V P  G   + +   + AY L +  +
Sbjct: 320 EVVAHNPNARLEDELVLKDYLIIQTRENGLTRIKVMPFNGQKPFELSFDEPAYVLGLDVN 379

Query: 369 LEFVSDKIRLRYEALNRPAQVRQLELAS-GAQQVLKETPVLGVFNADDYVSQRLWATSAD 427
            +  SDK+R+ Y +L  P  + +  L++   + +LK+  VLG F+A  Y ++R++ T+ D
Sbjct: 380 AQQDSDKLRVFYSSLTTPETIYEYHLSNPDRRDLLKQEQVLGGFDAGAYRAERVFVTARD 439

Query: 428 GTQVPISLVVKRDQLGK--ATPLYLYGYGAYGSSLDPWFSHARLSLLERGVAFAIAHVRG 485
           G +VP+SLV ++D+  K    PLY YGYG+YG +++P FS + +SLL+RG  +AIAHVRG
Sbjct: 440 GAKVPVSLVYRKDKFKKDGTNPLYQYGYGSYGYTVEPDFSSSVISLLDRGFVYAIAHVRG 499

Query: 486 GGELGEAWYRNGKQAHKQNTFSDFIACAEHLIAEGLTTSKQLAISGGSAGGLLIGAVLNQ 545
           G  LG  WY  GK  +K+N+F DFI     L  +G     ++  +GGSAGGLL+GA+ N 
Sbjct: 500 GEMLGRPWYDAGKLLNKKNSFYDFIDVTTALTEQGYGDKNKVVAAGGSAGGLLMGAIANM 559

Query: 546 RPELFQAAIAEVPFVDVLNTMLDPELPLTITEYDEWGNPEEPDVYARIKAYAPYENVRAQ 605
            PE + A  A VPFVDV+ TMLD  +PLT  EYDEWGNP +   +  + +Y+PY+NV   
Sbjct: 560 APEKYFAIAAHVPFVDVVTTMLDESIPLTTNEYDEWGNPNDKTYFDYMLSYSPYDNVADH 619

Query: 606 GYPHLLVIAGYNDSRVQYWEAAKWVAKLRDT-----KTDDNLLLLKTELGAGHGGMSGRY 660
            YPHLLV  G +DS+VQY+E AKWVAKLR+      K DD +LL   ++ AGHGG SGRY
Sbjct: 620 EYPHLLVTTGLHDSQVQYFEPAKWVAKLREVQNKWYKLDDKVLLFHVDMDAGHGGKSGRY 679

Query: 661 QGLRDVALEYGFVFKALGL 679
           +  +D A EY F    LG+
Sbjct: 680 RQYQDTAQEYAFFLSLLGM 698