Pairwise Alignments

Query, 161 a.a., cyclic nucleotide-binding protein from Pseudomonas simiae WCS417

Subject, 644 a.a., Cyclic nucleotide-binding domain (cNMP-BD) protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 50.8 bits (120), Expect = 4e-11
 Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 2/106 (1%)

Query: 43  SSIARDEVIFLEGDAGTFMCILHSGQVAVQKTNHEGQRLTIATLRSGRAFGEMAVLD-GE 101
           S+ +   VIF EGD       +  G VA+ KT   G  + +ATL  G  FGE A+LD   
Sbjct: 6   STYSDGAVIFREGDRADSAFFIVEGDVALYKTGEHGV-VRLATLGRGAFFGESAILDRAA 64

Query: 102 RRSASCVAASDCVLLNLGKDSLEKMLNEAPRVAAKIIRAIAIALSK 147
            R+ + +A     L  L + +L K +   P+VA KI+  +A  L +
Sbjct: 65  PRAVTAIARGAVTLKPLARGALLKRIANDPQVALKIMARLAQRLGE 110