Pairwise Alignments

Query, 377 a.a., ribonuclease D from Pseudomonas simiae WCS417

Subject, 381 a.a., ribonuclease D from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (546), Expect = 2e-60
 Identities = 131/374 (35%), Positives = 200/374 (53%), Gaps = 13/374 (3%)

Query: 1   MAIDIHWICDNDSLGQHCAEWQQLPFVALDTEFMRVDTFYPIAGLIQIGDGVSAYLIDPL 60
           ++++   I     L + C   +    V LDTEF+R  TF+P  GLIQ+ DG +  LIDP 
Sbjct: 7   LSVNYQIISQVGDLQRVCLAARDADVVMLDTEFVRTRTFFPQLGLIQMFDGENLSLIDPT 66

Query: 61  TIDNWQPLAALLENPAVIKVVHACSEDLEVLLRLTGSLPVPLFDTQLAAAYLNLGFSMGY 120
            +D   P   LL++ +V+KV+HAC EDLEV     G  P P+ DTQ+ AA+L  G S G+
Sbjct: 67  VLDEMTPFVELLQDTSVLKVLHACGEDLEVFQNAFGCTPFPMVDTQIMAAFLGYGLSTGF 126

Query: 121 SRLVQAVLDIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAEVYTRLRPQLSDDKYAW- 179
           + LVQ  L +EL K E+R+DWL RPLS+ Q+ YAA D  +L  +Y +L  Q++   + W 
Sbjct: 127 AALVQDQLQVELDKSESRTDWLARPLSDKQLEYAAADVFYLLPMYEKLVEQVTQAGW-WD 185

Query: 180 -VLEDGAELVANLRREVDPYEVYRDAKLAWKLSRAQLAVLRELCAWREQQARARDLPRNR 238
             L++    VA   +  +P   Y D K AW+L   +LA+L+ L  WR  +A  RDL  N 
Sbjct: 186 AALQESELQVAKRTKVSNPELAYLDIKGAWQLKPKELAILKPLATWRYHEAVNRDLALNF 245

Query: 239 IIREHSLWP---LAKSQPDNLAALGKIEDMHPRTVRQDGQFLLDLIKRAGSVPMDQWPPA 295
           +I+E  L     LA   P  +    + E + P  +R+    ++ ++K A   P D +PP 
Sbjct: 246 VIKETDLLTISRLALRSPKRM----EEEGVDPHAIRRHSSKIIAMVKTALETPADAYPPE 301

Query: 296 VAEPLPVDA-AALIKQLRAIGQAEAERLEMAPELMLRKKTLEALVKSGY--PDGPYQLPD 352
           +   +       L K+L+   ++ +    +A E +  KK L  L+   +     P +LPD
Sbjct: 302 IVPIMEYPGYKQLFKRLKDEVKSVSNTSGLATEFLASKKQLNQLLSWVWKRDRDPARLPD 361

Query: 353 SLRGWRRELMGQAL 366
            ++GWR  L+G+ L
Sbjct: 362 LMQGWRLPLLGEKL 375