Pairwise Alignments

Query, 377 a.a., ribonuclease D from Pseudomonas simiae WCS417

Subject, 371 a.a., ribonuclease D (RefSeq) from Shewanella amazonensis SB2B

 Score =  223 bits (569), Expect = 5e-63
 Identities = 130/367 (35%), Positives = 207/367 (56%), Gaps = 7/367 (1%)

Query: 3   IDIHWICDNDSLGQHCAEWQQLPFVALDTEFMRVDTFYPIAGLIQIGDGVSAYLIDPLTI 62
           ++ H++ D+++L     ++ Q   + LDTEF+R  T+Y   GLIQ+ DG +  LIDPL I
Sbjct: 2   LEFHYVKDDEALTALVDQYSQSRLLVLDTEFVRTRTYYAKLGLIQVYDGNTLALIDPLDI 61

Query: 63  DNWQPLAALLENPAVIKVVHACSEDLEVLLRLTGSLPVPLFDTQLAAAYLNLGFSMGYSR 122
            +     ALL NP ++K+VH+CSEDLEV  R     P PLFD+Q+AAA   +G  +GY++
Sbjct: 62  QDLSGFWALLTNPNILKLVHSCSEDLEVFARYGKVQPTPLFDSQIAAALSGMGHGLGYAK 121

Query: 123 LVQAVLDIELPKGETRSDWLQRPLSETQVSYAAEDAVHLAEVYTRLRPQLSD-DKYAWVL 181
           LV+  L   L KGE+R+DW++RPL++ Q+ YAA D  +L ++Y +L  +L    ++ WVL
Sbjct: 122 LVEECLGQTLDKGESRTDWIKRPLTDAQLQYAANDVFYLYQLYPQLEQKLKTLGRFDWVL 181

Query: 182 EDGAELVANLRREVDPYEVYRDAKLAWKLSRAQLAVLRELCAWREQQARARDLPRNRIIR 241
           E+GA L     +  +    Y   K A++L+  QLA L+ L AWR ++A  RDL    +I+
Sbjct: 182 EEGARLTEGRLQRPEAATAYLKVKNAFQLTPKQLAYLKVLAAWRLERALDRDLALGFVIK 241

Query: 242 EHSLWPLAKSQPDNLAALGKIEDMHPRTVRQDGQFLLDLIKRAGSVPMDQWPPAVAEPLP 301
           +H+L  LAK  P +++ L KI D+     R  G+ +L ++++A      + PPA  + + 
Sbjct: 242 DHALIALAKKPPRSISDLLKINDLSEHEKRIHGKDILKVLQKADV----ENPPAAIDVIA 297

Query: 302 VDAA--ALIKQLRAIGQAEAERLEMAPELMLRKKTLEALVKSGYPDGPYQLPDSLRGWRR 359
           +  A     K ++A      ER  +  EL   K+ +   ++  +       P  L+GWR 
Sbjct: 298 LKPAYKQAFKNIKAALTEICEREGLPSELFCSKRHIHEYLEYRWQGDAEDTPLLLQGWRG 357

Query: 360 ELMGQAL 366
           +L    L
Sbjct: 358 KLATDVL 364