Pairwise Alignments

Query, 292 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 301 a.a., Transcriptional activator of 4-hydroxyphenylacetate 3-monooxygenase operon, XylS/AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  117 bits (293), Expect = 3e-31
 Identities = 77/273 (28%), Positives = 130/273 (47%), Gaps = 13/273 (4%)

Query: 24  LHCETISRRSREYQWEIQPHRHADLCQLLYVHKGQAQLEIEGQRTTLNEATLQVLPPLCV 83
           +H + ++  +  +   +  HRH    Q+ YV  G  ++ ++ Q+   +     + PP   
Sbjct: 25  VHYDRLANLADFFGRNMPVHRHDRFFQVHYVKSGTVRVYLDDQQYVESGPMFFLTPPTIP 84

Query: 84  HGFRFPEDVEGYVVTLSAPLVSHL-QAQLGTTVDGLQT---------LGSYPAGKDSDYL 133
           H F    D +G+V+T+   LV  L  A  G    G+Q          LG   AG +   L
Sbjct: 85  HSFVTEADSDGHVLTVRQQLVWQLIDADPGLAPAGVQMPAACVALAQLGPGQAG-EVRRL 143

Query: 134 NSLFARLQDEYADEQPARDMMMHALVSVLLVWISRQAIQRRHPRAPRGREY--FRRFTQL 191
             LF  L +E    +P R   + AL  ++++ + R        R  R  +   F RF +L
Sbjct: 144 EYLFEELSEEVTAGRPGRSATLDALTRLIMISLLRLCSNSLEARPARHEDLKIFHRFNEL 203

Query: 192 VEQHYREHPKIEDLAHKLGISVSHLNGTCRELGGQPALQIMHDRQLLEAKRLLTYTSMTI 251
           +E HY +H  +   A  +G++ + LN  CR +   P+ +++ +R + EAKRLL +T  + 
Sbjct: 204 IEAHYLQHWPLSRYAEGIGVTEARLNDVCRRIADLPSKRLIMERLMQEAKRLLLFTGSSA 263

Query: 252 NEMSEVLGFSDPTNFSRLFRRRVGFSPKAFREQ 284
           NE+   LGF DP  FSR F+R    +P  +R++
Sbjct: 264 NEICYQLGFKDPAYFSRFFQRYAQLTPGEYRQR 296