Pairwise Alignments

Query, 292 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 296 a.a., AraC-family transcriptional regulator from Caulobacter crescentus NA1000

 Score =  142 bits (357), Expect = 1e-38
 Identities = 95/296 (32%), Positives = 143/296 (48%), Gaps = 8/296 (2%)

Query: 1   MTKT-AIPVFKLYGEHQQWPTPDLLHCETISRRSREYQWEIQPHRHADLCQLLYVHKGQA 59
           M KT  +P F L+GE  +      +H E +  R+R   W I+ H HADL  + ++  G  
Sbjct: 1   MPKTQVVPSFFLFGEPLRTVEGKFIHLEELDDRTRPNDWNIRAHAHADLNHVFHIAAGGG 60

Query: 60  QLEIEGQRTTLNEATLQVLPPLCVHGFRFPEDVEGYVVTLSAPLVSHLQAQLGTTVDGLQ 119
            + ++G+        L ++P   VHGF +  +  G V+T++   +  L A+        +
Sbjct: 61  VMHVDGEAIDFAAPCLLLVPSGRVHGFAYQVETAGSVLTIADSYLRDLTAREPAFASLFR 120

Query: 120 TLGSYPAGKDSDYLNSLFARLQDEYADEQPARDMMMHALVSVLLVWISRQAI--QRRHPR 177
                P    S+ + S    L  E     PA    +   + ++LV   R+ +  Q   P 
Sbjct: 121 APRQLPLDAQSE-IASWLGELSRELVWTAPAGGAAVEGRLLIVLVEAVRRLVRDQSATPA 179

Query: 178 APRGR-EYFRRFTQLVEQHYREHPKIEDLAHKLGISVSHLNGTCRELGGQPALQIMHDRQ 236
              G      RF +LVE HYRE   IE  A +LG++VS L   C  + G   L+++ DR 
Sbjct: 180 MQGGHVTLVARFRELVEAHYREGLPIETYAGRLGVAVSRLRAACLRVAGASPLRLVQDRL 239

Query: 237 LLEAKRLLTYTSMTINEMSEVLGFSDPTNFSRLFRRRVGFSPKAFREQLKAEAPHS 292
           LLEAKR L Y++MT+ E++  LGF DP  FSR F +  G SPK +R +    A HS
Sbjct: 240 LLEAKRALLYSNMTVAEVAYHLGFEDPAYFSRFFAKAEGVSPKRYRVE---RATHS 292