Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 307 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  285 bits (729), Expect = 9e-82
 Identities = 146/303 (48%), Positives = 200/303 (66%), Gaps = 12/303 (3%)

Query: 1   MDRLQAMRVFVTVVDLGSQSAAADHLDLSRPVVSRYLAELEDWVGARLLHRTTRKLSLTA 60
           MDRL+A +VFVT+V+ GS   AA+ LD+SR +V+RYLAE+E+W GARLLHR+TR+LSLT 
Sbjct: 1   MDRLEAAKVFVTIVERGSMIGAAEALDMSRSMVTRYLAEMEEWSGARLLHRSTRRLSLTD 60

Query: 61  AGSETLPRCRQLLELCGDMQAAVSEPDDAPRGLLRLSVSTSFGQAQLAEAIAEYVKRYPL 120
           AG + L  C++LLEL  ++ A        PRGLLR+S S       L   +  Y+ +YP 
Sbjct: 61  AGEQVLDYCQRLLELAQEVPAVSHAQSAQPRGLLRISCSQFMAHLLLPSVVRPYLAQYPQ 120

Query: 121 VTVDLQMLDRTVNLVDERIDLAIRTSNDLDPNLIARRLTVCRSVVCASPAYLLSHPAPQK 180
            +V+  +  +TV+LV ERIDLAIR +N+LDP LIARRL  C SVVCA+P+YL SH A   
Sbjct: 121 ASVNFHVTSQTVDLVAERIDLAIRITNELDPTLIARRLGECESVVCAAPSYLASHSAITH 180

Query: 181 VEDLAAHNCLTHSYFGKSLWHF------------EERGEHVSVPINGNITSNEASTLLRV 228
            EDL  HNCLT+SYFG  +W F            +E G+  ++P+ GN+++N++  +L  
Sbjct: 181 PEDLTRHNCLTYSYFGDVMWRFTQTPIAVKATPTQEVGQIFNIPVKGNLSANDSMVVLNA 240

Query: 229 TLAGAGVSMLPTYQAGDYIRRGELVRLLPEAEPRQMNIYAVYASRKHMPSALRSLLDFLV 288
           TLAG G++M P + A  ++  G LV LL E +P+ + +Y VY SRKHM  ALR ++D LV
Sbjct: 241 TLAGEGIAMQPLWAAKPHLDSGALVPLLREFKPQSLGVYGVYQSRKHMQPALRVMMDMLV 300

Query: 289 LRF 291
             F
Sbjct: 301 QHF 303