Pairwise Alignments

Query, 541 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 612 a.a., acetolactate synthase 3 catalytic subunit from Synechococcus elongatus PCC 7942

 Score =  203 bits (516), Expect = 2e-56
 Identities = 161/554 (29%), Positives = 259/554 (46%), Gaps = 40/554 (7%)

Query: 2   ATCGEVLVKLLEGYGVDQVFGIPGVHTV----ELYRGLARSSIRHVTPRHEQGAGFMADG 57
           AT    L+  L  +GV  +FG PG   +    EL+R  A   ++H+  RHEQGA   AD 
Sbjct: 12  ATGAYALIDSLCQHGVKHIFGYPGGAILPIYDELHRAEAAGRVQHILVRHEQGAVHAADA 71

Query: 58  YARTRGKPGVCFIITGPGMTNITTAMGQAYADSIPMLVISSVQSRSQLGGGRGKLHELPN 117
           Y+R  G+ GVCF  +GPG TN+ T +  A  DSIPM+V++    R+ +G    +  ++  
Sbjct: 72  YSRATGEVGVCFATSGPGATNLVTGIATAQMDSIPMVVVTGQVPRTAIGTDAFQETDI-- 129

Query: 118 QSAMMAGVAAFSHTLMSAAQLPGVLARAFALFQAGRPRPVHIEIPLDVLVENADALLGSE 177
              +   +   S+ +     +  ++A AF + Q+GRP PV I++P DV  E  D  +   
Sbjct: 130 -YGITLPIVKHSYVVRDPRDMARIVAEAFHIAQSGRPGPVLIDVPKDVGTEEFD-YVPVA 187

Query: 178 PVSVARAGAAPSA------VKHMSQLLAAAKKPLILAGGGAIDAA--PELTRLAEVLGAP 229
           P  +   G  P+       +     L+  A++PL+  GGGAI A    EL   AE    P
Sbjct: 188 PGDIRLPGYRPTTRGNPRQIAQAIALVKVARRPLLYVGGGAITAGAHAELRAFAERFQLP 247

Query: 230 VALTINAKGLLPSSHPL---LIGSTQTLVATRALVAEADVVLAIGTELAETDYDVT-FAG 285
           V  T+  KG     HPL   ++G   T  A  A V+E D+++A+G   A  D  VT    
Sbjct: 248 VTTTLMGKGAFDERHPLALGMLGMHGTAYANFA-VSECDLLIAVG---ARFDDRVTGKLD 303

Query: 286 GFEILGALLRVDIDPDQTVRNYPPQVALVADAQIAAQALLT---ELGSEPLPARNSAWGA 342
            F     ++ VDIDP +  +N  P+V +V D +     LL    E  S     R   W  
Sbjct: 304 EFASKAQVIHVDIDPAEVGKNRVPEVPIVGDVRQVLNELLARAEEQISADDATRTQPW-L 362

Query: 343 QRVAHLWAELTPI---WDTATRAQTLFLNTVLETLPNAVLVGDSTQ-PVYSGNLTLNLDH 398
            R+A+ W    P+   +     +    ++++ E  P+A    D  Q  +++     N   
Sbjct: 363 DRIAY-WKREYPLQIPYYADVLSPQQVIHSLGEAAPDAYFTTDVGQHQMWAAQFIKN--G 419

Query: 399 PRRWFNASTGYGTLGYALPAAIGAWLGRGDGQPVVCLIGDGGLQFTLPELASAVEARTPV 458
           PRRW  +S G GT+G+ +PAA+GA +   D   V+C+ GD  +   + EL +  +   P+
Sbjct: 420 PRRWI-SSAGLGTMGFGMPAAMGAQMALPD-DTVICVAGDASILMNIQELGTLAQYNIPI 477

Query: 459 IVLLWNNHGYEEIKKY---MVNRAIEPVGVDIYTPDFIGAAKALGCAAESIQGVESLRVA 515
            V++ NN     ++++     +       ++   PDF+  A+A G     +   + L+ A
Sbjct: 478 KVVVVNNGWQGMVRQWQEAFYDERYSNSNMERGMPDFVKLAEAFGIKGMRVSHPDELQAA 537

Query: 516 LRAAADRQGPTLIE 529
           +       GP  ++
Sbjct: 538 IAEMLAFDGPVFLD 551