Pairwise Alignments

Query, 310 a.a., 2-deoxy-3-keto-D-ribonoate cleavage enzyme (from data) from Pseudomonas simiae WCS417

Subject, 278 a.a., Uncharacterized conserved protein from Phaeobacter inhibens DSM 17395

 Score =  132 bits (331), Expect = 1e-35
 Identities = 93/301 (30%), Positives = 144/301 (47%), Gaps = 29/301 (9%)

Query: 4   NRPVIITCAVTGAIHTPSMSPHLPITAQEIADAAIGAAEAGAAIVHLHARDPNDGRPSQD 63
           N P II  A+TG++   + +P +PI+ +E  ++   A EAGA+I H H R   D  P+ D
Sbjct: 2   NNPCIICVAITGSVPRKAHNPAVPISIEEQIESTHEAYEAGASIAHCHVR-LEDETPTSD 60

Query: 64  PALFAEFLPQIK-AASDVVINITTGGAPTMGVEERLQPVMQFKPELASLNMGSMNFGLYE 122
           P  FA  +  I+    D++I ++TGG    G E     ++  +P++ASL++GS NF    
Sbjct: 61  PDRFARLMGGIRHHCPDMIIQLSTGGRSGAGRER--GGMLSLRPDMASLSVGSNNF---- 114

Query: 123 MLNRFTDFKHDWERPYLEESDDRIFRNTFRDITHILNACAENRTRFEIECYDIGHLYTAA 182
                                 R++ N    +  +         + EIE +D+ H++ A 
Sbjct: 115 --------------------PTRVYENPPDLVDWLAAQMLAYDVKPEIEAFDLSHIHQAV 154

Query: 183 HFLERGLLKPPLFIQSVFGLRGGIGGHPEDLAHMRRTADRLFGSDYVWSILGAGRGQIPL 242
                G LK PL++Q V G++  +        +  +T +RL   D  W   G G GQ+ +
Sbjct: 155 AMSRDGRLKAPLYVQFVLGVKNAMPVDRNVFDYYVKTMERL-APDAQWCAAGIGAGQLEV 213

Query: 243 ATMGLSMGSNARVGLEDSLWDGPGKLAASNADQVRRIRTVIEALGHRVATPDEAREILGL 302
               ++ G + R GLED+L      LA SNA  VRR   + +     VAT DEAR ILGL
Sbjct: 214 NEWAIAAGGHTRTGLEDNLRLDRQTLAPSNAALVRRAADLCDRYDRPVATCDEARAILGL 273

Query: 303 K 303
           +
Sbjct: 274 R 274