Pairwise Alignments

Query, 240 a.a., Transcriptional regulator of deoxyribose catabolism (from data) from Pseudomonas simiae WCS417

Subject, 235 a.a., GntR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 60.1 bits (144), Expect = 4e-14
 Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 20/229 (8%)

Query: 9   PTLRQVSRD---TLQDQVYRQIREALMSGRFQPGQKLTIRGLAEALGSSPMPVREALQRL 65
           P +RQ S +   T  + +   + EA++ G+  PG K++   LA+    S  P+REAL R+
Sbjct: 6   PLVRQASTEKESTKSENLTEYLIEAIVEGQLAPGSKISEPELAKQFQVSRGPLREALMRV 65

Query: 66  SAENAFEVTETSRLRVRLMTVERLREIRDARVALEGLLAEKAVLLLQKADLDEITDLCQQ 125
                 E       RV  ++  +L E+   R ALEG+ A  A   + + +L  +  L   
Sbjct: 66  EGLGLIERIPHIGARVIQLSPTKLVELYAVREALEGMAARLAARNITEIELAGLESLLST 125

Query: 126 MQHAADEVDVSRYLWT--NFAFHRRIYAVAQAELTMAAVENFWLHMGPCFALVAPDKAHL 183
                D+V+ + Y     +F FH RI    + +  +  +         C  L    + + 
Sbjct: 126 HSTHIDQVEGASYFHQQGDFDFHYRIIQACRNQQLIGLL---------CDELYHLLRMYR 176

Query: 184 QRSMEAHTRIVEALAARDGGGARAAVTDDIMQAADSLARLLVKNDRSRS 232
            +S  +H+R VEAL           +   I Q  + LA +L++   SRS
Sbjct: 177 YQSPRSHSRPVEALE------EHKFILRAIRQRDEELAEMLMRRHISRS 219