Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 296 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  114 bits (284), Expect = 4e-30
 Identities = 72/272 (26%), Positives = 133/272 (48%), Gaps = 3/272 (1%)

Query: 6   DLNDLQAFRAVVDKGSFRGAAEAIRISQPALSRRIEKLETALDVKLFERTTRRVSLTMVG 65
           ++  L+ F  V +  SF  AA+ + I+QPALS  I+K E  L V LF+R  R+V+LT  G
Sbjct: 9   EVRQLRHFVTVAEWESFTLAAQQLHIAQPALSISIKKFEQQLGVTLFKRDERKVALTHEG 68

Query: 66  RAFLPKVERMLDDLDLALMGISNVASTRMGNVTIACVPSTAYYFMPHVISEFHKLYPKIR 125
              L   +R+L  ++ A + +  +     G V +        YF P +I  F   +P ++
Sbjct: 69  EVLLEHAKRILQQVNDAQLAVDELKGVVKGEVRLGAPSMMGSYFFPQIIMAFKSHFPNLK 128

Query: 126 LRVLDASAGEVCNAVESGEADFGVSFSGSLADDVEFELLLQERYVLACRRDHPLAQRDSV 185
           + V++A    +   + SGE D GV  +  L DD+  + LL  + V    ++H LA+R  +
Sbjct: 129 MTVIEAGTQSIRRMLLSGELDIGVILNHDLPDDLAADPLLSSQMVAVVGKNHELAERRHL 188

Query: 186 PWSEAYEHDYITVDKTSGNRFLLDQALRGVRVKKPSICETHHVTTMIGLVEAGLGVAMVP 245
            ++E +EH+ +       +R  +D+  R  +       ET+ +  ++ +V+    +  + 
Sbjct: 189 TFAEFFEHELVMFKPGYFHRDFIDKVCREHKFTADFSFETNLLPMILSIVKHEYAITAL- 247

Query: 246 SIAMPAVEHPILVSVPLVEPQVMRNVGLIKRR 277
            + +     P + ++P  EP V  ++ L  R+
Sbjct: 248 -LELVTSNEPEVKAIPF-EPPVWLDLALAWRK 277