Pairwise Alignments

Query, 321 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 299 a.a., Cyn operon transcriptional activator from Pseudomonas fluorescens FW300-N2E2

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 9/204 (4%)

Query: 24  FRVIGQELSISRAAARLHLTQPAISQALKRLEEQLDCQLIVRRGPRFVLTEAGEQIFAIA 83
           F  + + LS ++AAA LH++QPA+SQ +++LEE L  QL  R G    LT+AG+     A
Sbjct: 13  FLAVAEHLSFTKAAAALHVSQPALSQQVRQLEESLGAQLFDRSGRTTRLTDAGDVYLLYA 72

Query: 84  GEMYGQVSQMSNALQKPGDEVIGKVRLLMISRINSDTFDEYLADFHREHPRVDLEVEVMR 143
              Y Q+ +  +A+    D   G +RL +     +      +  FH  +P++ L ++ + 
Sbjct: 73  RRAYQQLREAKSAIHDVSDLTRGSLRLAVTPTFTTYLVGPVIKAFHSRYPKITLNLKEIS 132

Query: 144 SSDIVAALLEKTATLGLSLNRRPQPRLEQHLFLRQRYAFFCGRHHPLFGRIGLAEGDLQS 203
              I   LL      G++ +    P ++    L +  A    R H L     +   DL +
Sbjct: 133 QERIEELLLAGELDAGIAFDEINTPNIDAIPLLNETLALVVSRQHRLAEERSIGLQDLNA 192

Query: 204 ENFVSFTSDQIGGMLSPLTIFRDQ 227
           E+ +         +LSP    R+Q
Sbjct: 193 ESLI---------LLSPEFATREQ 207