Pairwise Alignments

Query, 408 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 397 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score =  162 bits (410), Expect = 2e-44
 Identities = 108/354 (30%), Positives = 185/354 (52%), Gaps = 10/354 (2%)

Query: 24  LAILSVAVGAFALVTSEFLPVGVLNDVAADLSISAGHAGLMVTLPGIMAALAAPLLSVII 83
           LAI ++ + A+A+ T+EF+ VG+L  VA DL+I+   AGL+V++  +     AP+L+ + 
Sbjct: 3   LAIFALTIAAYAIGTTEFVIVGLLPTVATDLAITLPLAGLIVSVYALGVTFGAPVLTALT 62

Query: 84  GAMDRRYLLIGLTLIMIIANMVVAFASDFSLLLFGRVLLGISIGGFWATAIALSGRLAPK 143
           G ++R+ LL+GL  + I  N   A + ++ +LL  RVL   + G F++    ++  L P+
Sbjct: 63  GRIERKPLLLGLMALFIGGNTAAALSPNYEVLLVARVLSAFAHGVFFSVGSTIAADLVPE 122

Query: 144 GVDVAKATSIIMMGVTLATVLGVPVGTWLSGLMGWRMTFLVTALLGLPVLLAQVLLLP-I 202
               A A +++ MG+T+A V GVP+GT++  + GWR TF   + LG+        LLP  
Sbjct: 123 N-RRASAIAMMFMGLTVAIVTGVPIGTYIGQVFGWRATFWGVSGLGVVAFAGIATLLPGT 181

Query: 203 LKPEKPILVSDLPALFINPRARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSL 262
           L    P  + D   +  + R  +      L     F A+T++AP  +  +GF   ++  +
Sbjct: 182 LAKAAPASLLDQVRVLGSGRLLIVFAMTALGYGGTFVAFTFLAPILQEVTGFSERSVSLI 241

Query: 263 LLMFGVAGVAGNIFAGFAANRSVRYTLLLVALMIGTSTALFPYFATGLTGAAMLIALWGF 322
           L+++GVA   GNI  G  AN +    L+ + L+      +F +  T ++    L+ L   
Sbjct: 242 LVLYGVAIAIGNIAGGRIANTNPVKALIGLFLLQALVLVIFSF--TAVSPVLTLVTLAAL 299

Query: 323 AFGAFPACASIWMFVV------APKDVERGMPLFVALFQVIIALGSFFGGRIVD 370
            F +F     + ++VV       P  V+    L +A F + IALG++ GG +VD
Sbjct: 300 GFLSFANVPGLQLYVVQLAMEHRPGAVDVASALNIAAFNLGIALGAWLGGMVVD 353



 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 74/308 (24%), Positives = 113/308 (36%), Gaps = 57/308 (18%)

Query: 114 LLLFGRVLLGISIGGFWATAIALSGRLAPKGVDVA---KATSIIMMGVTLATVLGVPVGT 170
           L +F   +   +IG    T   + G L     D+A       +I+    L    G PV T
Sbjct: 3   LAIFALTIAAYAIG---TTEFVIVGLLPTVATDLAITLPLAGLIVSVYALGVTFGAPVLT 59

Query: 171 WLSGLMGWRMTFLVTALLGLPVLLAQVLLLPILKPEKPILV-----------------SD 213
            L+G +  +       LLGL  L         L P   +L+                 S 
Sbjct: 60  ALTGRIERK-----PLLLGLMALFIGGNTAAALSPNYEVLLVARVLSAFAHGVFFSVGST 114

Query: 214 LPALFINPRARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLMFGVAGVAG 273
           + A  +    R   IA++ +GL    A     P       + G   G     +GV+G+  
Sbjct: 115 IAADLVPENRRASAIAMMFMGLT--VAIVTGVPI----GTYIGQVFGWRATFWGVSGLGV 168

Query: 274 NIFAGFAA------NRSVRYTLLLVALMIGTSTALFPYFATGLTGAAMLIALWGFAFGAF 327
             FAG A        ++   +LL    ++G+   L  +  T L         +G  F AF
Sbjct: 169 VAFAGIATLLPGTLAKAAPASLLDQVRVLGSGRLLIVFAMTALG--------YGGTFVAF 220

Query: 328 PACASIWMFVVAPKDVERGMPLFVALFQVIIALGSFFGGRIVDQMGSAVLLSLATALVGV 387
              A I   V      ER + L + L+ V IA+G+  GGRI +        +   AL+G+
Sbjct: 221 TFLAPILQEVTGFS--ERSVSLILVLYGVAIAIGNIAGGRIAN-------TNPVKALIGL 271

Query: 388 GFVTVLVL 395
             +  LVL
Sbjct: 272 FLLQALVL 279