Pairwise Alignments

Query, 477 a.a., peptidase M48 from Pseudomonas simiae WCS417

Subject, 481 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  140 bits (354), Expect = 7e-38
 Identities = 123/420 (29%), Positives = 187/420 (44%), Gaps = 36/420 (8%)

Query: 11  LACLLASPGFADDLPSLGDASSAIVSPQQEYQLGRAWLAYLRGQVSQLNDPQLKDYVETS 70
           LA  L   G A     LG     I   + E +LGR +   ++ ++  + DP++K YV+  
Sbjct: 27  LALALTIQGVAPAWAFLGLGGFTI---KDEVELGRKFDVLIKSRMPLVEDPEVKVYVQDI 83

Query: 71  VYKLVETS--QVNDRRLEFILINSPQLNAFAAPGGIVGVNGGLFLNAQTEGEYASVLAHE 128
           V +L+E +  Q  D +   +L NS  LNAFA+PGG + V+ GL +    E E A VLAHE
Sbjct: 84  VARLLEQAPPQPFDFKTNVLLHNS--LNAFASPGGFIFVHTGLVMQMDHEAEVAGVLAHE 141

Query: 129 LAHLSQRHFARGVEAQQRMQLPMMAALLGGIIAAAAGAGDAGIAAIAGTQAAAIQEQRRF 188
           LAH +QRH A  +E   +MQ   + ++ G +  A  G G    AA+AG+ AA       +
Sbjct: 142 LAHATQRHIAGRIE---KMQTTSILSMAGALAGAFLGGGSGKGAAMAGSIAAGQSAMLNY 198

Query: 189 SRQNEQEADRIGILNLEKAGYDPRSMPTMFERL-MRQYRFDAKPPEFLLTHPVTESRI-- 245
           SR +E EAD IG+  L  AG+ P  M   FE++  +Q+      P +L THP    RI  
Sbjct: 199 SRVDETEADEIGLRYLIAAGFRPEGMVGAFEKIRKKQWAMGTDIPSYLSTHPAVNERINS 258

Query: 246 ---------ADTRNRAEQAKTGGKEDSLRYQLIRARVQLQYEDTSGLAAKRFQAQLDENP 296
                    AD R+R          D  R+  +R   + +Y D +   ++R  A   + P
Sbjct: 259 LSARIAALPADIRSR--------PNDDARFLRVRTICRARYGDPA--VSERLFA---DAP 305

Query: 297 KND-VARYGLAIAQIKGSQFKQARENLAPLLAKTPNDITYNLAQIQLDIDNGRLPDAQQR 355
             D +A+ G AI   + ++  +A       L  +P D        +     G    A   
Sbjct: 306 AGDCLAQLGKAILFSRQNRVAEATAAFDKALQCSPKDQLIWREAGRFHYTKGDKGRAAAM 365

Query: 356 TDKMLTQYPGNYPLNQIRVDLLLKQNRTADAEKALDSLLKSRPDDPDVWYQVAETRGLSG 415
             +     P +Y        LL    +   + +  D +L+  P+D +V Y      G SG
Sbjct: 366 LQRATLMNPDDYMALFFYARLLADSGQPQKSYQYFDEVLRRLPEDAEVHYYYGRVLGASG 425



 Score = 30.4 bits (67), Expect = 1e-04
 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 18/110 (16%)

Query: 356 TDKMLTQYPGNYPLNQI-RVDLLLKQNRTADAEKALDSLLKSRPDDPDVWYQVAE---TR 411
           ++++    P    L Q+ +  L  +QNR A+A  A D  L+  P D  +W +      T+
Sbjct: 297 SERLFADAPAGDCLAQLGKAILFSRQNRVAEATAAFDKALQCSPKDQLIWREAGRFHYTK 356

Query: 412 GLSGNIIGLHQARA-----EYFALV---------GDFQQAIQQLDFAKRR 447
           G  G    + Q        +Y AL          G  Q++ Q  D   RR
Sbjct: 357 GDKGRAAAMLQRATLMNPDDYMALFFYARLLADSGQPQKSYQYFDEVLRR 406