Pairwise Alignments

Query, 479 a.a., serine peptidase from Pseudomonas simiae WCS417

Subject, 450 a.a., protease Do (RefSeq) from Shewanella loihica PV-4

 Score =  282 bits (721), Expect = 2e-80
 Identities = 180/481 (37%), Positives = 266/481 (55%), Gaps = 43/481 (8%)

Query: 1   MSIPRLKSYLSIVATVLVLGQALPAQAVELPDFTQLVEQASPAVVNISTTQKLPERKVSN 60
           +S   L + L ++  V      L  +   LP    ++E+ +PAVV ++ +       VS 
Sbjct: 8   LSAALLGASLMVMPAVSQAAIPLAVEGQALPSLAPMLEKTTPAVVAVAVSGT----HVSK 63

Query: 61  QQMPDLEGLPPMLREFFERGMPQPRAPRGGGGGQREAQSLGSGFIISSD-GYILTNNHVI 119
           Q++PD        R FF    P+ +        +R  + LGSG II +  GYI+TNNHVI
Sbjct: 64  QRLPDA------FRYFFGPNAPREQVQ------ERPFKGLGSGVIIDAKKGYIVTNNHVI 111

Query: 120 ADADEILVRLADRSELKAKLVGTDPRSDVALLKIEGKDLPVLKLGKSQDLKAGQWVVAIG 179
             ADEIL+ L D  E++AKL+GTD  SDVALL+IE K+L  LK   S +LK G + VAIG
Sbjct: 112 EGADEILIGLHDGREIEAKLIGTDAESDVALLQIEAKNLVALKRADSDELKVGDFAVAIG 171

Query: 180 SPFGFDHTVTQGIVSAIGRS-LPNENYVPFIQTDVPINPGNSGGPLFNLAGEVVGINSQI 238
           +PFG   TVT GIVSA+GRS L  E    FIQTD  IN GNSGG L NL GE++GIN+ I
Sbjct: 172 NPFGLGQTVTSGIVSAMGRSGLGIEMLENFIQTDAAINSGNSGGALVNLNGELIGINTAI 231

Query: 239 YTRSGGFMGVSFAIPIDVAMDVSNQLKSGGKVSRGWLGVVIQEVNKDLAESFGLDKPAGA 298
               GG +G+ FAIP ++  ++ +QL   G+V RG LGV  ++++ +LA+ FGLD   G 
Sbjct: 232 VAPGGGNVGIGFAIPANMVNNLVDQLIEHGEVRRGVLGVSGRDLDSELAQGFGLDSQHGG 291

Query: 299 LVAQIQDDGPAAKGGLHVGDVILSMNGQPIVMSADLPHLVGALKAGSKAKLEVIREGKRQ 358
            V ++  D  A K G+  GD+I+S+N +PI    +L   +G + AG+K KL +IR+G  +
Sbjct: 292 FVNEVMPDSAADKAGIKAGDIIVSVNDKPIKSFQELRAKIGTMGAGAKVKLGLIRDGDEK 351

Query: 359 TVELTVGAIPEEGATLDALGNTKP---GAERSSNRLGIAVAELTAEQKKTFDLKSGVVIK 415
           TV   +G   ++  T  A G   P   GA   +N+ G+ + E+                 
Sbjct: 352 TVTAVLGEASQQTET--AAGAVHPMLAGATLENNKKGVEITEI----------------- 392

Query: 416 EVQDGPASLIGLQPGDVITHLNNQAIDSTKQFTDIAKALPKNRSVSMRVLRQGRASFITF 475
             Q  PA+  GL  GD+I  +N   I+  K+    A+   ++ +V++++LR   + ++  
Sbjct: 393 -AQGSPAAASGLLKGDIIVGVNRTRIEDLKELK--AELKEQHGAVALKLLRGDNSLYLVL 449

Query: 476 K 476
           +
Sbjct: 450 R 450



 Score = 36.6 bits (83), Expect = 2e-06
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 391 LGIAVAELTAEQKKTFDLKS---GVVIKEVQDGPASLIGLQPGDVITHLNNQAIDSTKQF 447
           LG++  +L +E  + F L S   G V + + D  A   G++ GD+I  +N++ I S ++ 
Sbjct: 268 LGVSGRDLDSELAQGFGLDSQHGGFVNEVMPDSAADKAGIKAGDIIVSVNDKPIKSFQEL 327

Query: 448 TDIAKALPKNRSVSMRVLRQGRASFITFKLAE 479
                 +     V + ++R G    +T  L E
Sbjct: 328 RAKIGTMGAGAKVKLGLIRDGDEKTVTAVLGE 359