Pairwise Alignments

Query, 223 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  174 bits (441), Expect = 1e-48
 Identities = 99/219 (45%), Positives = 135/219 (61%), Gaps = 2/219 (0%)

Query: 1   MRVLLVEDHLQLAESVAQALKSTGLTVDVLHDGVAADLALSSEEYAAAILDVGLPRMDGF 60
           MR+LLVED   L ES+  AL   G TVD L  G     AL +E++ A ILD+ LP MDG 
Sbjct: 1   MRLLLVEDDTLLGESMQVALSRQGYTVDWLERGGGVVTALKTEQFTALILDLTLPDMDGL 60

Query: 61  EVLARLRARGKNLPVLMLTARSDVKDRVHGLNLGADDYLAKPFELTELEARVKALLRRSV 120
           EVL ++R  G  LPV++LTAR D+ DRV GL+ GAD+Y+ KPF L EL AR++ ++RRS 
Sbjct: 61  EVLRQIRRAGYTLPVMILTARDDISDRVKGLDGGADEYIGKPFALEELLARLRLIIRRSS 120

Query: 121 LGGERQQACGVLVYDLDTRRFTVGGELMTLTSREQAVLEALIARPGRVMSKEQLASQVFG 180
              E   + G L   L  +      + + LT  E  +L +L+ + GRVMSKE L   + G
Sbjct: 121 GSAEELISVGELDLSLSKQEIYYAQQALKLTRNEYKILASLMTQAGRVMSKELLQQALHG 180

Query: 181 LDEEASPDAIEIYVHRLRKKLDGQPIAIVTFRGLGYLLE 219
            DE +S +AIE+++H LRKKL    +  V  RG+GY++E
Sbjct: 181 WDEGSSDNAIEVHIHNLRKKLPDNLVKNV--RGVGYMIE 217