Pairwise Alignments

Query, 223 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  158 bits (400), Expect = 7e-44
 Identities = 85/220 (38%), Positives = 131/220 (59%), Gaps = 2/220 (0%)

Query: 1   MRVLLVEDHLQLAESVAQALKSTGLTVDVLHDGVAADLALSSEEYAAAILDVGLPRMDGF 60
           M++L+VED +QL + +  AL+ TG   ++  DG+ A    ++EE+   +LD+GLP++DG 
Sbjct: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60

Query: 61  EVLARLRARGKNLPVLMLTARSDVKDRVHGLNLGADDYLAKPFELTELEARVKALLRRSV 120
            VL  +R    N PV++L+AR  +  RV GLN GADDYL KPFE+ EL AR++A LRR+ 
Sbjct: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120

Query: 121 LGGERQQACGVLVYDLDTRRFTVGGELMTLTSREQAVLEALIARPGRVMSKEQLASQVFG 180
                    G L  D  T +    G+ ++LT+ E  V+   +  P +V+S+ +L   ++ 
Sbjct: 121 GNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIYK 180

Query: 181 LDEEASPDAIEIYVHRLRKKLDGQPIAIVTFRGLGYLLEA 220
            D +   + IE+++ R+RKK+   P  I T RGLGY L A
Sbjct: 181 QDFDRDSNTIEVFIGRIRKKI--APDVIKTVRGLGYQLHA 218