Pairwise Alignments

Query, 540 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 536 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  445 bits (1145), Expect = e-129
 Identities = 263/547 (48%), Positives = 366/547 (66%), Gaps = 18/547 (3%)

Query: 1   MKISTKLLLSFLLCALVTLAVGLLGIKGVVRLSTALELTFSNNLVSVSN----TAATLNG 56
           M I+ +  L F L   + LA+G+  +  + ++ T+ E    N++ S+      T  TL  
Sbjct: 1   MNIAPRAFLGFALIGALMLALGVFALTQMSKIRTSGENIAQNSVPSIKALNEFTQLTLRL 60

Query: 57  LVAHNRGLYRLMDASKGDVSPQDRDRVRQDIAQELKRSQASYATYRATPLEDDERAAGDK 116
            V      YRL+   + D+  +  D V Q  +Q+++ +Q    TY       DERAA D+
Sbjct: 61  RVLS----YRLLVNREPDIQQKTYDLVEQR-SQQIRAAQT---TYEKLISASDERAAYDQ 112

Query: 117 LDQIWPTYISSSERIMALLDGGQVDQARAQLNT---SNNELFRQARELIRVMIESNNRQI 173
           L Q+   Y    ER+  L    QVD+ RA LNT   SN++    A   I  ++E NN Q 
Sbjct: 113 LVQLLGQYRQLEERMKTLSRNNQVDELRALLNTELLSNSDAINAA---IDRLVEINNLQA 169

Query: 174 KEGAVAADELRNSALTWMISGIVLAFLIAIIIGVLITRLITRPIAQAVQSAQRIAQGDLT 233
           +     A +  +SA  W+++ +++A  + ++   L+T  IT+PIA A+ +A+ IA+G+LT
Sbjct: 170 EALNKGAAQQYSSAFNWVVTLLLIATGLTLLFAWLLTNSITKPIANALDAAEEIAKGNLT 229

Query: 234 QAIITERTDEAGQLLMALSDMQGGLKSTLVEIANASDQLASAAEELSAVTDESSRGLTRQ 293
           + I  + +DEAG+LL A+S MQ  L+ TL  I+ ++ QLASAAEEL++VTDES+RGLT+Q
Sbjct: 230 RPITVDGSDEAGRLLRAMSTMQEKLRDTLQRISGSATQLASAAEELNSVTDESARGLTQQ 289

Query: 294 NDEIQQAATAVNQMTAAVDEVASNAVSTSEASRQATTEAEDGRQQVEQAVSGMSSMVVEI 353
           N+EI+QAATAVN+MT+AV+EVA NAVSTSEAS+ ATT A DGR  V++ VS +  M  ++
Sbjct: 290 NNEIEQAATAVNEMTSAVEEVARNAVSTSEASKNATTSAGDGRDLVQETVSAIERMSADV 349

Query: 354 NDSTQSVADLAGQVREIGKVIDVIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVR 413
             +   + +LA + R+IGKV+DVIRG+ADQTNLLALNAAIEAARAGE GRGFAVVADEVR
Sbjct: 350 QSTAALIGNLADESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVR 409

Query: 414 ALAHRTQISTVDIEKMIGDVQTGADDAVAAMNKSLTWANNTQTLAQNAGEALQRITASVA 473
           ALAHRTQ ST +IE+MIG +Q+G + AV +M  S   A +T  +A+ AG +L  I  ++ 
Sbjct: 410 ALAHRTQQSTSEIERMIGSIQSGTEHAVDSMRNSTERAESTLNIARGAGMSLDTINTAIV 469

Query: 474 KINERNLVIASASEEQAQVAREVDRNLLNIQDLSTQTAAGAHQTNASSQDLSRLATSFNV 533
           +INERNLVIASA+EEQAQVAREVDRNL+NI+DLS Q+A GA+QT+A+S +LSRLA   N 
Sbjct: 470 EINERNLVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGANQTSAASAELSRLAVDLNN 529

Query: 534 LVSKFQL 540
           +V +F L
Sbjct: 530 MVGRFSL 536