Pairwise Alignments

Query, 540 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  222 bits (566), Expect = 2e-62
 Identities = 131/345 (37%), Positives = 205/345 (59%)

Query: 196 VLAFLIAIIIGVLITRLITRPIAQAVQSAQRIAQGDLTQAIITERTDEAGQLLMALSDMQ 255
           ++  L+ I +GV+I+R + +P+       +++AQGDLT  I     DE G +   +++  
Sbjct: 192 LIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDELGIVAQRINNSI 251

Query: 256 GGLKSTLVEIANASDQLASAAEELSAVTDESSRGLTRQNDEIQQAATAVNQMTAAVDEVA 315
             +   LVE   ++  +A AA  +++  +E+S+ +  Q D++ Q ATA+NQMTA V +VA
Sbjct: 252 AAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADVA 311

Query: 316 SNAVSTSEASRQATTEAEDGRQQVEQAVSGMSSMVVEINDSTQSVADLAGQVREIGKVID 375
            +A  T+  +  A+ EA  G + V  +V  + ++ VE+  +T  V  L   V +I +V  
Sbjct: 312 GHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEVTS 371

Query: 376 VIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQISTVDIEKMIGDVQT 435
           VI GI++QTNLLALNAAIEAARAG+QGRGFAVVADEVR LA RT  ST +I+ MI  +Q 
Sbjct: 372 VISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINRLQQ 431

Query: 436 GADDAVAAMNKSLTWANNTQTLAQNAGEALQRITASVAKINERNLVIASASEEQAQVARE 495
            A    +AM KS   A N+   A+NAG  L  I   +  ++++   IA+A+EEQ+ VA E
Sbjct: 432 LAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVAEE 491

Query: 496 VDRNLLNIQDLSTQTAAGAHQTNASSQDLSRLATSFNVLVSKFQL 540
           ++RN+  I D + + +  A      S+ L+ L+   +  ++ F+L
Sbjct: 492 MNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536