Pairwise Alignments

Query, 230 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

Subject, 320 a.a., ribosomal large subunit pseudouridine synthase B from Sinorhizobium meliloti 1021

 Score =  101 bits (251), Expect = 2e-26
 Identities = 81/226 (35%), Positives = 111/226 (49%), Gaps = 6/226 (2%)

Query: 5   RFLSNLPRFNRKQVRLLLVEQRVSVDGVAVSDPHHEVRAFS-RVCVDDEVLQAGKPARYF 63
           R LS L   +R Q   L+ E RVSV G  ++D  H V   + R+ VD  V+ A +   Y 
Sbjct: 87  RALSKLGYCSRTQAEKLIAEGRVSVAGRKITDLSHWVDIEADRIAVDGTVI-AAQARVYL 145

Query: 64  MLHKPQGCVSATADPQ-HPTVLDLLDEPDKDELHIAGRLDFNTTGLMLITNDGQWSRRLT 122
           ML+KP+G V+   DP+  PTV   LD  D   L   GRLD  + GL+L TND   ++RL 
Sbjct: 146 MLNKPRGLVTTRDDPEGRPTVFSCLDNVDVPSLSPVGRLDKASEGLLLFTNDTVLAQRLL 205

Query: 123 QPQTKLPKVYLVETEQDIGSDYAATFARGLYFAFEDLTTQPAELVLLGPRTA--RLSIIE 180
            P+T L KVY V+     G   AA    G+    E L     E +  G R +   + + E
Sbjct: 206 DPETHLGKVYHVQVRGIFGEAMAARMVEGVTEGGELLRALRVERLKGGDRNSWIEIELDE 265

Query: 181 GRYHQVKRMFGHFDNKVVGLHRERMGPLVLDAALAPGEYRALTDDE 226
           GR  Q++RM      + + L R  +G + L   L  G  R LT+ E
Sbjct: 266 GRNRQIRRMLDVLGFECLRLLRVSIGEIRL-GDLPKGASRPLTEAE 310