Pairwise Alignments

Query, 313 a.a., hydroxymethylglutaryl-CoA lyase from Pseudomonas simiae WCS417

Subject, 516 a.a., 2-isopropylmalate synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 69/305 (22%), Positives = 129/305 (42%), Gaps = 23/305 (7%)

Query: 9   LIVQEVSPRDGLQIEPTWVETADKIALIDQLSLAGFSRIEAGSFVSPKAIPALRDGEQVF 68
           +I+ + + RDG Q     +   +K+ +   L   G   IEAG  VS          + + 
Sbjct: 5   VIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDIIEAGFPVSSPG--DFESVQTIA 62

Query: 69  KGIER-KAGVIYVALIPNLKGAQRAIESC-ADELNLVMSASQTHNLANMRMRCEASLAAF 126
           K I+  +   +  A+  ++  A  A++   A  ++  +S S  H    +R   +  +A  
Sbjct: 63  KNIKNSRVCALSRAVAKDIDAAAEALKVAEAFRIHTFISTSTIHVQDKLRRSYDDVVAMA 122

Query: 127 GDIVSFAGDFPVRLNASIATTFGCPFEGKIDEDRVLQIVEAYQALGIRGISLADTTGMAN 186
              V  A  +   +       F C   G+   D + ++VEA    G R I++ DT G   
Sbjct: 123 VKAVKHARQYTDDVE------FSCEDAGRTPIDNLCRMVEAAINAGARTINIPDTVGYTV 176

Query: 187 PRQVERLVKRVLERVSASD---LTLHFHNTRGLGLCNVLAAYEAGARRFDAALGGLGGCP 243
           P +   +++ +  RV   D   +++H H+  G+ + N +AA +AGAR+ +  + G+G   
Sbjct: 177 PSEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAIQAGARQVEGTINGIG--- 233

Query: 244 FAPGASGNICTEDLVNLC----DEVGIHTGIDLPHLLNMSRRLPALLGHELPGQVAKAGR 299
                +GN   E++  +     + +G+ TGI    +   S+ +  L    +    A  G 
Sbjct: 234 ---ERAGNCALEEIAMIIKTRQELLGVTTGIKHDEISRTSKLVSQLCNMPIQSNKAIVGA 290

Query: 300 NCDLH 304
           N   H
Sbjct: 291 NAFSH 295