Pairwise Alignments

Query, 313 a.a., hydroxymethylglutaryl-CoA lyase from Pseudomonas simiae WCS417

Subject, 522 a.a., 2-isopropylmalate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 71/308 (23%), Positives = 134/308 (43%), Gaps = 25/308 (8%)

Query: 7   DALIVQEVSPRDGLQIEPTWVETADKIALIDQLSLAGFSRIEAGSFVS-PKAIPALRDGE 65
           D +I+ + + RDG Q     +   +K+ +   L   G   +E G  VS P    +++   
Sbjct: 3   DRVIIFDTTLRDGEQALAASLSVKEKLQVALALERLGVDVMEVGFPVSSPGDFESVQTIA 62

Query: 66  QVFKGIERKAGVIYVALIPNLKGAQRAIESCADELNL--VMSASQTHNLANMRMRCEASL 123
           +  K    +   +  AL  ++  A +A+ S A++  +   +S S  H  + ++   +  L
Sbjct: 63  RHIKN--SRVCALSRALEKDIDAAAQAL-SVAEQFRIHTFISTSNIHVESKLKRSFDQVL 119

Query: 124 AAFGDIVSFAGDFPVRLNASIATTFGCPFEGKIDEDRVLQIVEAYQALGIRGISLADTTG 183
                 V +A  F   +       F C   G+   D + ++VEA  + G R I++ DT G
Sbjct: 120 DMAVGAVKYARRFTDDVE------FSCEDAGRTPIDNLCRMVEAAISAGARTINIPDTVG 173

Query: 184 MANPRQVERLVKRVLERVSASD---LTLHFHNTRGLGLCNVLAAYEAGARRFDAALGGLG 240
              P +   +++ +  RV   D   +++H H+  GL + N +AA +AGAR+ +  + G+G
Sbjct: 174 YTVPSEFGGIIQTLFNRVPNIDQAVISVHCHDDLGLSVANSIAAVQAGARQIECTVNGIG 233

Query: 241 GCPFAPGASGNICTEDLVNLC----DEVGIHTGIDLPHLLNMSRRLPALLGHELPGQVAK 296
                   +GN   E++  +     D +G++T I+   +   S  +  L    +    A 
Sbjct: 234 ------ERAGNCSLEEIAMILATRKDMLGLYTNINAREIHRTSSLVSQLCNMPIQPNKAI 287

Query: 297 AGRNCDLH 304
            G N   H
Sbjct: 288 VGSNAFTH 295