Pairwise Alignments

Query, 313 a.a., hydroxymethylglutaryl-CoA lyase from Pseudomonas simiae WCS417

Subject, 514 a.a., 2-isopropylmalate synthase from Methanococcus maripaludis S2

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 67/303 (22%), Positives = 121/303 (39%), Gaps = 34/303 (11%)

Query: 11  VQEVSPRDGLQIEPTWVETADKIALIDQLSLAGFSRIEAGSFVSPKAIPALRDGEQVFKG 70
           V + + RDG Q     +    K+ +   LS  G   IEAG        P   +GEQ    
Sbjct: 26  VFDTTLRDGEQTPGVSLMPDQKMDIAKNLSEIGVDAIEAG-------FPVSSEGEQ---- 74

Query: 71  IERKAGVIYVALIPNLKGAQRAIES-------CA-DELNLVMSASQTHNLANMRMRCEAS 122
            E    +  + L   + G  RA++        C  D ++  ++ S  H    ++M  E  
Sbjct: 75  -ESIKNITSLGLDAEICGLARAVKKDIDVAIDCGVDSIHTFIATSPLHREYKLKMSKEKI 133

Query: 123 LAAFGDIVSFAGDFPVRLNASIATTFGCPFEGKIDEDRVLQIVEAYQALGIRGISLADTT 182
           +    + + +  +        +   F      + + D + ++ +     G   I++ DT 
Sbjct: 134 IDIAVESIEYIKEH------GVIVEFSAEDATRTELDYLKEVYKKAVEAGADRINVPDTV 187

Query: 183 GMANPRQVERLVKRVLERVSASDLTLHFHNTRGLGLCNVLAAYEAGARRFDAALGGLGGC 242
           G+  P  +  L+K +   +    +++H HN  G+ + N +AA EAGA +    + GLG  
Sbjct: 188 GVMVPNSMSYLIKELKNDIKVP-ISVHCHNDFGIAVSNSVAAVEAGAEQVHCTVNGLG-- 244

Query: 243 PFAPGASGNICTEDLVNLCDEV-GIHTGIDLPHLLNMSRRLPALLGHELPGQVAKAGRNC 301
                 +GN   E+ V   + V GI+T ++   L  +S+ +    G +     A  G N 
Sbjct: 245 ----ERAGNASLEETVMTLNMVYGINTNVNTKMLTKLSKLVSHYTGIKTQPNKAIVGENS 300

Query: 302 DLH 304
             H
Sbjct: 301 FAH 303



 Score = 25.0 bits (53), Expect = 0.004
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 156 IDEDRVLQIVEAYQALGIRGISLADTTGMANPRQVERLVKRVLERVSASDL 206
           + E++  +IVE  +A+G +G  + D   MA     E + KR L+     DL
Sbjct: 359 VSEEQFCEIVERVKAIGDKGKIVTDADVMA---IAEDITKRTLKSERIVDL 406