Pairwise Alignments

Query, 313 a.a., hydroxymethylglutaryl-CoA lyase from Pseudomonas simiae WCS417

Subject, 492 a.a., 2-isopropylmalate synthase from Methanococcus maripaludis S2

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 24/292 (8%)

Query: 17  RDGLQIEPTWVETADKIALIDQLSLAGFSRIEAGSFVSPKAIPALRDGEQVFKGIERKAG 76
           RDG Q     +  ++K+ L  +L   G + IEAGS ++ K     R+  ++  G    A 
Sbjct: 10  RDGEQTPGVSLSPSEKLELAIKLDELGVNIIEAGSAITSKGE---REAMKLVTGQNLNAE 66

Query: 77  VI-YVALIPNLKGAQRAIESCADELNLVMSASQTHNLANMRMRCEASLAAFGDIVSFAGD 135
           +  +V  +P       A+    D ++LV+  S  H    +R   E +L      V +A D
Sbjct: 67  ISSFVRALP--VDIDAALSCDVDSVHLVVPTSDIHMTYKLRKSREENLKDAMHAVEYAKD 124

Query: 136 FP--VRLNASIATTFGCPFEGKIDEDRVLQIVEAYQALGIRGISLADTTGMANPRQVERL 193
               V L+A  AT        + D + + ++    + L    I + DT G+  P +   L
Sbjct: 125 HGLIVELSAEDAT--------RSDVEFLKELFLKGEELKADRICVCDTVGILTPLKAIDL 176

Query: 194 VKRVLERVSASDLTLHFHNTRGLGLCNVLAAYEAGARRFDAALGGLGGCPFAPGASGNIC 253
           +K +   +    +++H HN  G+   N L+A  AGA +    + G+G        +GN  
Sbjct: 177 IKTMKNTIKIP-VSIHCHNDFGMATANTLSAISAGADQCHVTINGIG------ERAGNAS 229

Query: 254 TEDLV-NLCDEVGIHTGIDLPHLLNMSRRLPALLGHELPGQVAKAGRNCDLH 304
            E++V +L     I TGID   L  +SR +   +   +P   A  G N   H
Sbjct: 230 LEEVVMSLKSLYDIETGIDTEKLHKISRIVSKYMKIPVPANKALVGDNAFAH 281