Pairwise Alignments

Query, 313 a.a., hydroxymethylglutaryl-CoA lyase from Pseudomonas simiae WCS417

Subject, 310 a.a., hydroxymethylglutaryl-CoA lyase (RefSeq) from Shewanella sp. ANA-3

 Score =  217 bits (552), Expect = 3e-61
 Identities = 118/302 (39%), Positives = 179/302 (59%), Gaps = 5/302 (1%)

Query: 2   ISDYCDALIVQEVSPRDGLQIEPTWVETADKIALIDQLSLAGFSRIEAGSFVSPKAIPAL 61
           +S   D + + E+ PRDGLQ E   V T  K+ALI+ L+ AG  RIEAGSFVSPK +P +
Sbjct: 9   LSASSDRVSLFEMGPRDGLQNEAA-VPTQAKVALIESLADAGVKRIEAGSFVSPKWVPQM 67

Query: 62  RDGEQVFKGIERKAGVIYVALIPNLKGAQRAIESCADELNLVMSASQTHNLANMRMRCEA 121
            D   V + I R+AGV+Y AL PN+KG + A+++ A E+ +  +ASQ+ +  N+    E 
Sbjct: 68  ADSGDVLRQIRRQAGVVYSALTPNVKGLELALDAKASEVAIFGAASQSFSQRNINCSIEE 127

Query: 122 SLAAFGDIVSFAGDFPVRLNASIATTFGCPFEGKIDEDRVLQIVEAYQALGIRGISLADT 181
           S+  F  ++  A    + +   ++   GCP+EG+I    V ++ E    +G   ISL DT
Sbjct: 128 SIERFIPLMDMAKAANIPVRGYVSCVLGCPYEGEIAASEVARVSEILYKMGCYEISLGDT 187

Query: 182 TGMANPRQVERLVKRVLERVSASDLTLHFHNTRGLGLCNVLAAYEAGARRFDAALGGLGG 241
            G+  P +  ++++ V+ERV    L LHFH+T G  L N+ A  + G R FDA++ GLGG
Sbjct: 188 IGVGTPLKARKMLQAVMERVPVEMLALHFHDTYGQALANITACLDLGVRSFDASVAGLGG 247

Query: 242 CPFAPGASGNICTEDLVNLCDEVGIHTGIDLPHL----LNMSRRLPALLGHELPGQVAKA 297
           CP+A GASGN+ +EDLV +   +G+ TGIDL  L      +S++L  L G ++   + + 
Sbjct: 248 CPYAKGASGNLASEDLVYMLHGLGLKTGIDLEKLALAGFGISKQLNRLNGSKVANAILQG 307

Query: 298 GR 299
            +
Sbjct: 308 AK 309