Pairwise Alignments

Query, 395 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 414 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (279), Expect = 3e-29
 Identities = 96/366 (26%), Positives = 158/366 (43%), Gaps = 10/366 (2%)

Query: 14  AFLAQVGISS---YLPAVPAIARSLPAAEGHVALALAIYLVGMALPMLLWGHLSERFGRK 70
           A LA VG ++   Y+P++  +A+    +   +   +A YL+   L   ++G LS+R GRK
Sbjct: 28  AILAAVGQATQTMYVPSIGYMAQEFLVSPAALQAVMACYLIPYGLSQFVYGTLSDRIGRK 87

Query: 71  PVLLAALAVYALASAAIPSAFNVEAFLALRLVQGLGAGGVSVMARVLVRDSFSGALLAKG 130
           P+++A LA+Y + S     A     FL    VQGLG G    M+R L RD F GA L K 
Sbjct: 88  PIIIAGLAIYIIGSLIALFAHQYSWFLIGSFVQGLGIGCGGAMSRTLSRDCFEGAELHKV 147

Query: 131 LSWLGMTFVIALGIGQFAGSLLQVILGWEAIFYGLAIGALGLMLVLQRVMFPALV----K 186
            S + M  + +  +    G  L    GW + +  L++ A+ +++ +   M   L     K
Sbjct: 148 NSLISMCLIFSPLVAPVLGGYLTESFGWRSSYLFLSLFAIAVVITMMTSMVETLPATARK 207

Query: 187 ADESLSAWRIYATIVRHPPFLYPALAGGLGYGVIIAFNTCAPLILQGRFEWSAAQYGGLG 246
            +  L ++    +  R   +L   +A   G  V   F   A ++L G     A     L 
Sbjct: 208 KEPVLRSYHYVLSDRRFQGYLICLVATFAGLAV---FEAAAGVLLGGVLGLPATTVSLLF 264

Query: 247 WPISAAYLAGALMVNRFVARSGRLTMMGWGVALLLTGTAVMLLGSVFAGGLAILLWLPYC 306
                 YLAGA + N         T M  G+  +LTG+ V++L  +     A+ L     
Sbjct: 265 VLPIPGYLAGAWLSNVIARHWREKTAMHVGLLAILTGSLVIMLPGLLGMTTALSLIGGAT 324

Query: 307 VAVLGQSMSYPISLSVANDESPVSGSYAMALSGFMHQLMAALIGGMASLLVSQQAWSLAA 366
           +  LG  + +P + + A    P       A+ G M  L A L    A++  +     L  
Sbjct: 325 IYFLGAGILFPAATTGALSPFPYHAGTGGAILGGMQNLGAGLATLFAAMFPASDQLPLGI 384

Query: 367 LCMALA 372
           + + ++
Sbjct: 385 IMLLMS 390