Pairwise Alignments

Query, 395 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 401 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  120 bits (301), Expect = 7e-32
 Identities = 95/376 (25%), Positives = 169/376 (44%), Gaps = 14/376 (3%)

Query: 16  LAQVGISSYLPAVPAIARSLPAAEGHVALALAIYLVGMALPMLLWGHLSERFGRKPVLLA 75
           L  + I  YLPA+P IAR      G V + L  Y  G A+  LL G L++ FGR+PV+L 
Sbjct: 28  LTPLAIDMYLPAMPTIARDFGVNAGAVQITLTAYTAGFAIGQLLHGPLADSFGRRPVMLC 87

Query: 76  ALAVYALASAAIPSAFNVEAFLALRLVQGLGAGGVSVMARVLVRDSFSGALLAKGLSWLG 135
            + ++ +A+    +   +EA   +R  QG      +V+ + +VRD F     A+ +S++ 
Sbjct: 88  GIFLFGIAAMVSATTNGIEALTYIRAAQGFAGAAAAVVIQAVVRDMFDREDFARAMSFVT 147

Query: 136 MTFVIALGIGQFAGSLLQVILGWEAIFYGLAI-GALGLMLVLQRV---MFPALVKADESL 191
           +   +A  +    G  L +  GW +IF+ LA+  AL + +V+ ++   + P   +     
Sbjct: 148 LVVTLAPLVAPMIGGHLAIWFGWRSIFWVLALFAALVIAMVMWKIPETLSPENRQPLRFR 207

Query: 192 SAWRIYATIVRHPPFLYPALAGGLGYGVIIAFNTCAPLILQGRFEWSAAQYGGLGWPISA 251
           S  R Y  + ++P  +    +G   +  + AF T    +    +  S   +G L      
Sbjct: 208 STMRNYFDLCKNPVAMGLIFSGAFSFAGMFAFLTAGAFVYIDIYGVSPDGFGYLFGLNIV 267

Query: 252 AYLAGALMVNRFVARSGRLTMMGWGVALLLTGTAVMLLGSVFAGGLAILLW--LPYCVAV 309
           A +A   +  RFV + G   M+ + + L L     + +  V   G    LW  +P+ V  
Sbjct: 268 AMIALTTINGRFVKKIGSHNMLRFALFLQLMAGIGLFVSWVLDWG----LWGTVPFVVLF 323

Query: 310 LGQ-SMSYPISLSVANDESPVSGSYAMALSGFMHQLMAALIGGMASLLVSQQAWSL---A 365
           +G  S     S+ +   + P     A +L+G +     ++IG + + L   + W +    
Sbjct: 324 VGTISTIGSNSMGLLLSKYPRMAGTASSLAGTLRFGTGSIIGAVVAALPGTETWPMIFVM 383

Query: 366 ALCMALAGAAWVCVAR 381
           A C  L+GA +  + R
Sbjct: 384 AACSVLSGAFYWTLGR 399