Pairwise Alignments

Query, 395 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 379 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella loihica PV-4

 Score =  107 bits (267), Expect = 6e-28
 Identities = 93/362 (25%), Positives = 163/362 (45%), Gaps = 11/362 (3%)

Query: 1   MKNSTTLTLACSAAFLAQVGISSYLPAVPAIARSLPAAEGHVALALAIYLVGMALPMLLW 60
           MK + ++ L        Q+  + Y PA+P IA             L+IY +  A  ++ W
Sbjct: 1   MKTTPSIPLMVILMMFPQIVETLYSPALPHIAAGFDVPLALAGQTLSIYFLAFAFGVVCW 60

Query: 61  GHLSERFGRKPVLLAALAVYALASAAIPSAFNVEAFLALRLVQGLGAGGVSVMARVLVRD 120
           G L +  GR+  +L  L +Y +A+ A   A + +  LA+R +   GA   SV+ + ++RD
Sbjct: 61  GILCDHLGRRRTMLLGLGLYGIAAFAALWAPSFQWLLAMRALSAFGAAVGSVVTQTMLRD 120

Query: 121 SFSGALLAKGLSWLGMTFVIALGIGQFAGSLLQVILGWEAIFYGLAIGALGLMLVLQRVM 180
           SF G  LAK  +++GM   I+  +G  +G LL  + G+ A+F+ L++ A+ L  V    +
Sbjct: 121 SFDGTALAKVFAYMGMGIAISPVVGMLSGGLLTSLGGYPAVFFTLSLMAVLLYAVCLLRL 180

Query: 181 FPALVKADESLSAWRIYATIVRHPPFLYPALAGGLGYGVII-AFNTCAPLILQGRFEWSA 239
                   + L  W +   +       + AL    G+ V++ ++    P + Q R   S 
Sbjct: 181 PETRPATMQPLPLWALAKRLATDGNIWHNALLVA-GFNVLLFSYYLQGPFVFQ-RLGLST 238

Query: 240 AQYGGLGWPISAAYLAGALMVNRFVAR-SGRLTMMGWGVALLLTGTAVMLLGSVFAGGLA 298
             +G  G  ++   L G+ +    + R + +  ++     L L G   + L     G L 
Sbjct: 239 QAFGYSGIALAIGTLVGSAINKTLLQRGASQPRLLRLASLLALVGAVGVYLSETHLGFL- 297

Query: 299 ILLWLPYCVAVLGQSMSYPISLSVANDESPVSGSYAMALSGFMHQLMAALIGGMASLLVS 358
               LP  + V    ++ P  LS A  E       A AL G ++ L+ AL  G+A + ++
Sbjct: 298 ----LPMVLIVAAFGIAIPNILSQALVEYRDQAGAAGALFGLLYYLLIAL--GLAMVSLA 351

Query: 359 QQ 360
           +Q
Sbjct: 352 EQ 353