Pairwise Alignments

Query, 299 a.a., transporter from Pseudomonas simiae WCS417

Subject, 330 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 79/276 (28%), Positives = 115/276 (41%), Gaps = 16/276 (5%)

Query: 27  RIVVQEIHPLLNGLGRALFAAIPAAALLLWRRERWPTWRQVRGLCLVIAGV--ILGFPVL 84
           RI VQ++ PL    GR L A      L+LW+RE WP   + + L L   GV  I  +  L
Sbjct: 39  RIAVQQLSPLAVACGRYLLATT-VLLLILWQREGWPPLNRRQQLLLFGLGVSGIALYNWL 97

Query: 85  SAWAMQTLPASHGALVNGLQPLCVALYAAWLSHERPSKAFWAYAALGSGLVLSYALITGA 144
               +  +PAS  AL+  L P  +AL AA  + +R     W +A +G  L+ +  L+   
Sbjct: 98  FFIGLSLIPASRAALIIALNPTAIALGAAIWTGDRLRS--WQWAGVGLSLIGAILLL--- 152

Query: 145 GSIQA--------GDLLMLGAIAVGGLGYAEGGRLAKEMGGWQVICWALVLSTPVLIGPV 196
           GS QA        GDL ++G +    +      +  + +    V   A    + +LIG  
Sbjct: 153 GSRQAGALTLPGWGDLALVGCVLCWTVYSLLARQALRSLSPLTVTTGACCWGSVLLIGLW 212

Query: 197 WYLAAQHQGAISMRAWWAFGYVSLFSQFLGFFAWYAGLAMGGIARVSQIQLLQIFFTIAF 256
               AQ    +S     A  ++ L    L F  +  G+   G AR      L   F  A 
Sbjct: 213 LGQGAQLPVNVSFSTGSAIAFLGLGGTALAFCLYANGIERLGAARAGLFINLVPVFGSAI 272

Query: 257 SALFFGEHIEPITWLFACGVIVTVMLGRKTAVQPAP 292
            AL   E +  +T L    V+  V LG    +QP P
Sbjct: 273 GALLLQEPLSGLTLLGGLLVLAGVGLGTLQRLQPVP 308