Pairwise Alignments

Query, 388 a.a., arabinose transporter permease from Pseudomonas simiae WCS417

Subject, 411 a.a., transport transmembrane protein from Sinorhizobium meliloti 1021

 Score =  256 bits (655), Expect = 6e-73
 Identities = 148/378 (39%), Positives = 211/378 (55%), Gaps = 5/378 (1%)

Query: 6   LILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAIGAPFMALATAKL 65
           + LA+  F IGT EF IMGLLP VA D+ VS+P AG +++ YALGV +GAP +A+  A+ 
Sbjct: 32  IALAVGGFGIGTGEFAIMGLLPQVADDVAVSVPAAGAVISAYALGVVVGAPLIAVLAARF 91

Query: 66  PRKAALVALMGIFIIGNLLCALASDYNVLMFARVVTALCHGAFFGIGSVVAANLVPANKR 125
            R   L+ LM +F +GN   A+A  ++ L+ AR    L HGA+FG+ ++VAA L   N+R
Sbjct: 92  ARFHVLLVLMAVFALGNFASAVAPSFHPLVAARFFAGLPHGAYFGVAALVAAGLAAPNQR 151

Query: 126 ASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVVALIGLIRFLPAKRDEE 185
           A AV  +  GLT+A + G PL    GQ  GWRS F  V  I ++ ++ +   +P  R + 
Sbjct: 152 ARAVGRVMMGLTIATLFGTPLVAWFGQALGWRSAFAIVGGISLMTMVLIWLHVPRDRGDP 211

Query: 186 KLDMRAELAALKGAGIWLSLSMTALFAASMFTLFTYVAPLLGDVTGVSPKGVTWTLLLIG 245
           +     EL+AL    +WL L + A+    MF +FTY+AP L  V GVS   V   L + G
Sbjct: 212 QATPLRELSALGSLQVWLLLGICAIGCGGMFAVFTYIAPALTQVAGVSVANVPVMLSVFG 271

Query: 246 LGLTVGNIIGGKLADKRLAATLIGVFISMAVVSTALTWTSVAVIPTEITLFLWATASFAA 305
            G+ +GNI+G +LAD  L    IG+ +   V +  L + ++      I   L+    FA 
Sbjct: 272 AGMILGNIVGSRLADWSLTRA-IGIALVFNVFAYILFYFTMTSPWMAIVNVLFIGGGFAV 330

Query: 306 VPALQINVVTFGKAAPNLVSTLNIGAFNIGNALGAWVGGSVIAHGFGLTRVPLAAAVLAI 365
           VP +Q  ++     A  L + L+  AFN  NALGAW+GG  IA G+G T   L  AVL I
Sbjct: 331 VPGVQTRLMDVAGKAQTLAAALSHSAFNFANALGAWLGGIAIAAGYGWTSPGLVGAVLGI 390

Query: 366 ----LALLVTLITFRQTG 379
               + L   ++  R+TG
Sbjct: 391 GGFAIFLASVIVDRRRTG 408